Non-Coding RNA Search

Ss1.1-Pig4-TMW8040B13.5

Sequence:


               
               CTCGAAAATGGCCCCGGTGTCGGCGGACGACCTCCTCAAGACGCTGGCACCCTACAGCAG
CCAGCCAGTCACCCCGAGCCAGCCTTTCAAGATGGACCTCACAGAGCTGGACCATATCAT
GGAGGTGCTGGTCGGGTCCTGAGCCCCGCGGCCGCGCCCCTGCACCCCGACAGCTCTCCG
CACTGTGCATGCACCCTTGCTTGCCTTTTTCCAAGAAAAGAAACATTCTACAAAAGGATC
ACACTAGTTTTTGCTTTGAGCAGAGTTGGAGTGCCTTCATCCACGTATGACCACTTTTTA
ATATGCTCTTTTGAGTGGTTCCTCGGAGACCTACTACCCGGGAATAGGAAAGAATACATT
TGAAGACAATGTCGCTATATTGAATGACAAAAATAAACAGTTCAAGTGAAGCACAAGGAA
TAAGTTGGAAAAGTTGTAAATTGCATGTGCATATTTGTCTATTTTTTCTATAAGTTTTAT
TGCAAGAGGTAAAAAAAGAAAATATATATATATTATTTAGATAATCTCAGTACCTTTTCT
GGCATTTTCGCCCTGTATAGGTTGACTTGGCAATTCAGCCTTTTTAGAGGCATTAACTAC
TCCTCGTAAGTGTTGCATTTACATGGCTGTTTAGAAACTGCTGCCCAAATTTATTTTATA
TTTTTGTACAGATTCCGCAGTTTATGATATTGTTTTTCTAAAAACAAATGCTGTTTATAC
ATATGAGATAGCTATTTTGATAGGATTTGCTCACAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCGAAAATGGCCCCGGTGTCGGCGGACGACCTCCTCAAGACGCTGGCACCCTACAGCAG
CCAGCCAGTCACCCCGAGCCAGCCTTTCAAGATGGACCTCACAGAGCTGGACCATATCAT
GGAGGTGCTGGTCGGGTCCTGAGCCCCGCGGCCGCGCCCCTGCACCCCGACAGCTCTCCG
CACTGTGCATGCACCCTTGCTTGCCTTTTTCCAAGAAAAGAAACATTCTACAAAAGGATC
ACACTAGTTTTTGCTTTGAGCAGAGTTGGAGTGCCTTCATCCACGTATGACCACTTTTTA
ATATGCTCTTTTGAGTGGTTCCTCGGAGACCTACTACCCGGGAATAGGAAAGAATACATT
TGAAGACAATGTCGCTATATTGAATGACAAAAATAAACAGTTCAAGTGAAGCACAAGGAA
TAAGTTGGAAAAGTTGTAAATTGCATGTGCATATTTGTCTATTTTTTCTATAAGTTTTAT
TGCAAGAGGTAAAAAAAGAAAATATATATATATTATTTAGATAATCTCAGTACCTTTTCT
GGCATTTTCGCCCTGTATAGGTTGACTTGGCAATTCAGCCTTTTTAGAGGCATTAACTAC
TCCTCGTAAGTGTTGCATTTACATGGCTGTTTAGAAACTGCTGCCCAAATTTATTTTATA
TTTTTGTACAGATTCCGCAGTTTATGATATTGTTTTTCTAAAAACAAATGCTGTTTATAC
ATATGAGATAGCTATTTTGATAGGATTTGCTCACAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-756, gnl|bosTau2|chr11 (45505282-45504507)
               

               
               1-756, gnl|Hg17|chr2 (64774853-64774064)
               

               
               1-756, gnl|Mm7|chr11 (20600603-20601388)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-756, gnl|bosTau2|chr11 (45505282-45504507)
               

               
               1-756, gnl|Hg17|chr2 (64774853-64774064)
               

               
               1-756, gnl|Mm7|chr11 (20600603-20601388)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cag (0.151194)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cag (0.151194)

	1-756, gnl\|bosTau2\|chr11 (45505282-45504507)
	1-756, gnl\|Hg17\|chr2 (64774853-64774064)
	1-756, gnl\|Mm7\|chr11 (20600603-20601388)