Non-Coding RNA Search

Ss1.1-Pig4-TMW8040D02.3

Sequence:


               
               CTTCTTTACATTAAATAACATCTAGTGATTGGTCTAATTTCAAGGTAGTGATCAGTATAA
GCAATATTTCAAGATATATGTGAAAAACTAATATCCAAGCAACTGGTTTCTGTTAAAAGA
CAGACTCGGGTACTGCTAATACTCCTGTGGTTTGTTGCTAACATTCACAATAAAAAACAG
TGGTAAATTTCAGTTTAAGTTTGTGAATAAATATAATTTTTCTTATCCAAGCTCAAGTAC
ACCTGGAAATCTTACATGCTGAGGTTAAGTATATTAATATGTTAGTCTTCTTTTTACAGT
TGTGAAACAACAGCTCACTCTGGTTTTTCATAATAATTAATAGTTTATAGTTGAATATTT
TCAAAATTCCTCTTTTGAGCCTAAAGTACACATTGTAATCTTATTGTTCAACATTAACTG
AATGCTTCACCAGATTTTATGCAGAGCTTTAGCTCTTCTCTGAACTCCCAGAATGCTAAC
GAGAGTGGTTTCATGTTACAGGAATACAAGCGCAAGTTAGCCAGGGTTTCCCTGGTGCGC
AAAGAACTCAGGTCCCGGATCCAGAGCCTGCCAGACTTATCTCGATTGCCCAATGTCACT
GGCAGCCACATGCATCTGCCCTTTGCGGGAGACATCTACAGTGAAGATTGATGACCAGTC
TCTTTCCAGGGCCCAGGACTTTGCAAGAGATGGAGACAGGTTAGGTGGATAGGCCTGTAG
CGTTATTTTTGTATATTGTTGAGAGAGTGACATTAACAAAAGAAACAAGTAATTTATAAA
ATTGTTTAAAAATGTTGGTTTGTTTACTATTTTATTGGTAAGTTAACATGACTTAGTTTA
AACAAAGTGATGATCTCTGTGTATTAATAAGCTCACAAATAGTGATTATTTTCAGAAGAT
CTTTTTGTAAATTTTTTTGATCCAGGGCCTTGTGAGAAATTCCATGTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTCTTTACATTAAATAACATCTAGTGATTGGTCTAATTTCAAGGTAGTGATCAGTATAA
GCAATATTTCAAGATATATGTGAAAAACTAATATCCAAGCAACTGGTTTCTGTTAAAAGA
CAGACTCGGGTACTGCTAATACTCCTGTGGTTTGTTGCTAACATTCACAATAAAAAACAG
TGGTAAATTTCAGTTTAAGTTTGTGAATAAATATAATTTTTCTTATCCAAGCTCAAGTAC
ACCTGGAAATCTTACATGCTGAGGTTAAGTATATTAATATGTTAGTCTTCTTTTTACAGT
TGTGAAACAACAGCTCACTCTGGTTTTTCATAATAATTAATAGTTTATAGTTGAATATTT
TCAAAATTCCTCTTTTGAGCCTAAAGTACACATTGTAATCTTATTGTTCAACATTAACTG
AATGCTTCACCAGATTTTATGCAGAGCTTTAGCTCTTCTCTGAACTCCCAGAATGCTAAC
GAGAGTGGTTTCATGTTACAGGAATACAAGCGCAAGTTAGCCAGGGTTTCCCTGGTGCGC
AAAGAACTCAGGTCCCGGATCCAGAGCCTGCCAGACTTATCTCGATTGCCCAATGTCACT
GGCAGCCACATGCATCTGCCCTTTGCGGGAGACATCTACAGTGAAGATTGATGACCAGTC
TCTTTCCAGGGCCCAGGACTTTGCAAGAGATGGAGACAGGTTAGGTGGATAGGCCTGTAG
CGTTATTTTTGTATATTGTTGAGAGAGTGACATTAACAAAAGAAACAAGTAATTTATAAA
ATTGTTTAAAAATGTTGGTTTGTTTACTATTTTATTGGTAAGTTAACATGACTTAGTTTA
AACAAAGTGATGATCTCTGTGTATTAATAAGCTCACAAATAGTGATTATTTTCAGAAGAT
CTTTTTGTAAATTTTTTTGATCCAGGGCCTTGTGAGAAATTCCATGTT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               89-948, gnl|bosTau2|chr24 (16381336-16382221)
               

               
               89-948, gnl|Hg17|chr18 (31827603-31826809)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               89-948, gnl|bosTau2|chr24 (16381336-16382221)
               

               
               89-948, gnl|Hg17|chr18 (31827603-31826809)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fco (0.157208)
               

               
               pla (0.133672)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.157208)
               

               
               pla (0.133672)

	89-948, gnl\|bosTau2\|chr24 (16381336-16382221)
	89-948, gnl\|Hg17\|chr18 (31827603-31826809)