Non-Coding RNA Search

Ss1.1-Pig4-TMW8040E20.3

Sequence:


               
               TTGTTTTTTTTTTTAAATGATTAAATTCTCAGTGAGGCTGTTTTCCTTTTCCCCCAGTAA
CATTCCTGAATTTACTGTATTATCTTAGTGTAGTACTCGCATGACATGATTCCTGACACC
TGATGACAGGGTCATTCTTCTGTATTCTGTTAGTGACACAAAAGACTCGGCCCTACTCCC
ACTCACTTCACGTCCAGTCAGTCTGTTTTACAGGCCAGAGCTATTTCTTCAGTGCCCTGT
CCCTACCAGCTACTGGCCATTCTCAGCTGGGATCTGTTCTTTTCAGCTGTTGCTTGTGTG
GAAAAAAAAAAAAAGCAAGACTATGTTGCTGTATAGGAGACTATGAAAGTGACTCAGGCA
GGACTTAATAGATTCTGTACCCAGGAGACTACTTGTTAAGTGGGTTGGGATTGATTTTTT
TGAAAATCAAGTTTGACTCATTGATAAAACACTTCTGAGTCTGAGTGGGGCTAGGTCACA
TGTTACCTCTGAATCTTTTGGCCTCTCTAACAACATCTAACCTGCGCGGGCAGTGCAGAG
GCACGCAGTGATGTGAGAGAAACCAAGTCACAACCTTGGAACACCATGACCACTTACTTC
ATTCCTAACTAAATCAGAACTCTCTGTCTCTGTATATATATCTCCCCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGTTTTTTTTTTTAAATGATTAAATTCTCAGTGAGGCTGTTTTCCTTTTCCCCCAGTAA
CATTCCTGAATTTACTGTATTATCTTAGTGTAGTACTCGCATGACATGATTCCTGACACC
TGATGACAGGGTCATTCTTCTGTATTCTGTTAGTGACACAAAAGACTCGGCCCTACTCCC
ACTCACTTCACGTCCAGTCAGTCTGTTTTACAGGCCAGAGCTATTTCTTCAGTGCCCTGT
CCCTACCAGCTACTGGCCATTCTCAGCTGGGATCTGTTCTTTTCAGCTGTTGCTTGTGTG
GAAAAAAAAAAAAAGCAAGACTATGTTGCTGTATAGGAGACTATGAAAGTGACTCAGGCA
GGACTTAATAGATTCTGTACCCAGGAGACTACTTGTTAAGTGGGTTGGGATTGATTTTTT
TGAAAATCAAGTTTGACTCATTGATAAAACACTTCTGAGTCTGAGTGGGGCTAGGTCACA
TGTTACCTCTGAATCTTTTGGCCTCTCTAACAACATCTAACCTGCGCGGGCAGTGCAGAG
GCACGCAGTGATGTGAGAGAAACCAAGTCACAACCTTGGAACACCATGACCACTTACTTC
ATTCCTAACTAAATCAGAACTCTCTGTCTCTGTATATATATCTCCCCA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               4-621, gnl|bosTau2|chr10 (9061871-9062504)
               

               
               4-621, gnl|Hg17|chr15 (63655854-63656469)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-621, gnl|bosTau2|chr10 (9061871-9062504)
               

               
               4-621, gnl|Hg17|chr15 (63655854-63656469)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               pla (0.133672)
               

               
               eje (0.0988338)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)
               

               
               eje (0.0988338)

	4-621, gnl\|bosTau2\|chr10 (9061871-9062504)
	4-621, gnl\|Hg17\|chr15 (63655854-63656469)