Ss1.1-Pig4-TMW8040F08.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGCTTCTCAGTGCCGATGGACCTCACAGAAACGTGCTTAAAATAAAACCACCTATGTGCT TCACTGAAGAAGACGCCAAGTTTATGGTGGACCAGCTTGATGGGATTCTAACAGATTTAG AAGATGCCTTTGGAGCCAAAATGGAGAATGTGATCTCTGAGAACAGTCCATGCAGAACCA GGATGCCAAATGAAGCACGCTCTGAAATGCTCCGTGACGGTGCCCCAGACCCCCAGGAAA ATCCCAGCCACAAGCGAAATGGATTGTGCACAGATAAACACTCACTGCTCAGTAAGAGGC TCAAGACATGAGGGGATTAGCACTTTACAGTAAGATAAATATCCAGAGTTCTAGAGAACG GATGCAAGTGTCCTTTCTGTCCCAGCTCTGTTGTCCCCTCTAAAGGAAGAATTTGCATTT CCACTCAGATGTGTAAATAAAAAGGCAAATGAGTAGTCCTAAGACTAAATCCAAGGGATA ATCAAACCACGTCAAGATTGTTAGTTCAGCCTCTCGCCTGTTAATTCCTTACTTGAAATT CCTGAAAGTACTTCACTTATTCTACTCAACAGACGCTTCAAATTGAATGTCAAGTTGGCA GTGTTACGTCTCGTGTTTTAATGTTTGACATGAGAGAGCAAAGTACATAGATTCCTGAAC TTTGGAGACTGAAGGGCCTTAAAATATGAATTCTTTAATGATTTAATTTATAATATATTT ATGGACTATAATAAAATAAAAGATGATGTAAGCCAAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGCTTCTCAGTGCCGATGGACCTCACAGAAACGTGCTTAAAATAAAACCACCTATGTGCT TCACTGAAGAAGACGCCAAGTTTATGGTGGACCAGCTTGATGGGATTCTAACAGATTTAG AAGATGCCTTTGGAGCCAAAATGGAGAATGTGATCTCTGAGAACAGTCCATGCAGAACCA GGATGCCAAATGAAGCACGCTCTGAAATGCTCCGTGACGGTGCCCCAGACCCCCAGGAAA ATCCCAGCCACAAGCGAAATGGATTGTGCACAGATAAACACTCACTGCTCAGTAAGAGGC TCAAGACATGAGGGGATTAGCACTTTACAGTAAGATAAATATCCAGAGTTCTAGAGAACG GATGCAAGTGTCCTTTCTGTCCCAGCTCTGTTGTCCCCTCTAAAGGAAGAATTTGCATTT CCACTCAGATGTGTAAATAAAAAGGCAAATGAGTAGTCCTAAGACTAAATCCAAGGGATA ATCAAACCACGTCAAGATTGTTAGTTCAGCCTCTCGCCTGTTAATTCCTTACTTGAAATT CCTGAAAGTACTTCACTTATTCTACTCAACAGACGCTTCAAATTGAATGTCAAGTTGGCA GTGTTACGTCTCGTGTTTTAATGTTTGACATGAGAGAGCAAAGTACATAGATTCCTGAAC TTTGGAGACTGAAGGGCCTTAAAATATGAATTCTTTAATGATTTAATTTATAATATATTT ATGGACTATAATAAAATAAAAGATGATGTAAGCCAAAAAAAAAAAAAA |
| Aligned organism(s): 32 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
| 1-114, gnl|bosTau2|chr6 (5691804-5691917) | |
| 1-114, gnl|canFam2|chr32 (31999502-31999653) | |
| 1-114, gnl|danRer3|chr5 (16768918-16768780) | |
| 1-114, gnl|dasNov1|scaffold_2515 (68378-68227) | |
| 1-114, gnl|echTel1|scaffold_245277 (16338-16489) | |
| 1-114, gnl|fr1|chrUn (114172999-114172845) | |
| 1-114, gnl|galGal2|chr4 (38229847-38229713) | |
| 1-114, gnl|hg17|chr4 (110025144-110025295) | |
| 1-114, gnl|Hg17|chr4 (110025272-110025159) | |
| 1-114, gnl|loxAfr1|scaffold_6661 (49629-49763) | |
| 1-114, gnl|mm7|chr3 (130468345-130468204) | |
| 1-114, gnl|Mm7|chr3 (130468225-130468338) | |
| 1-114, gnl|monDom2|scaffold_37 (921959-921812) | |
| 1-114, gnl|oryCun1|scaffold_202386 (55024-54887) | |
| 1-114, gnl|panTro1|chr3 (126515188-126515339) | |
| 1-114, gnl|rheMac2|chr5 (101658064-101658215) | |
| 1-114, gnl|rn3|chr10 (37117130-37116996) | |
| 1-114, gnl|tetNig1|chrUn_random (43719356-43719493) | |
| 1-114, gnl|xenTro1|scaffold_520 (573226-573094) | |
| 182-762, gnl|bosTau2|chr6 (5694975-5695536) | |
| 182-762, gnl|canFam2|chr32 (31996085-31996493) | |
| 182-762, gnl|dasNov1|scaffold_2515 (72290-71880) | |
| 182-762, gnl|echTel1|scaffold_245277 (14009-14355) | |
| 182-762, gnl|hg17|chr4 (110020791-110021196) | |
| 182-762, gnl|Hg17|chr4 (110021373-110020800) | |
| 182-762, gnl|loxAfr1|scaffold_68566 (6084-5618) | |
| 182-762, gnl|mm7|chr3 (130471613-130471213) | |
| 182-762, gnl|Mm7|chr3 (130471036-130471599) | |
| 182-762, gnl|monDom2|scaffold_37 (929184-928765) | |
| 182-762, gnl|oryCun1|scaffold_202386 (59469-59061) | |
| 182-762, gnl|panTro1|chr3 (126510845-126511249) | |
| 182-762, gnl|rheMac2|chr5 (101653917-101654321) |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-114, gnl|bosTau2|chr6 (5691804-5691917) | |
| 1-114, gnl|canFam2|chr32 (31999502-31999653) | |
| 1-114, gnl|danRer3|chr5 (16768918-16768780) | |
| 1-114, gnl|dasNov1|scaffold_2515 (68378-68227) | |
| 1-114, gnl|echTel1|scaffold_245277 (16338-16489) | |
| 1-114, gnl|fr1|chrUn (114172999-114172845) | |
| 1-114, gnl|galGal2|chr4 (38229847-38229713) | |
| 1-114, gnl|hg17|chr4 (110025144-110025295) | |
| 1-114, gnl|Hg17|chr4 (110025272-110025159) | |
| 1-114, gnl|loxAfr1|scaffold_6661 (49629-49763) | |
| 1-114, gnl|mm7|chr3 (130468345-130468204) | |
| 1-114, gnl|Mm7|chr3 (130468225-130468338) | |
| 1-114, gnl|monDom2|scaffold_37 (921959-921812) | |
| 1-114, gnl|oryCun1|scaffold_202386 (55024-54887) | |
| 1-114, gnl|panTro1|chr3 (126515188-126515339) | |
| 1-114, gnl|rheMac2|chr5 (101658064-101658215) | |
| 1-114, gnl|rn3|chr10 (37117130-37116996) | |
| 1-114, gnl|tetNig1|chrUn_random (43719356-43719493) | |
| 1-114, gnl|xenTro1|scaffold_520 (573226-573094) | |
| 182-762, gnl|bosTau2|chr6 (5694975-5695536) | |
| 182-762, gnl|canFam2|chr32 (31996085-31996493) | |
| 182-762, gnl|dasNov1|scaffold_2515 (72290-71880) | |
| 182-762, gnl|echTel1|scaffold_245277 (14009-14355) | |
| 182-762, gnl|hg17|chr4 (110020791-110021196) | |
| 182-762, gnl|Hg17|chr4 (110021373-110020800) | |
| 182-762, gnl|loxAfr1|scaffold_68566 (6084-5618) | |
| 182-762, gnl|mm7|chr3 (130471613-130471213) | |
| 182-762, gnl|Mm7|chr3 (130471036-130471599) | |
| 182-762, gnl|monDom2|scaffold_37 (929184-928765) | |
| 182-762, gnl|oryCun1|scaffold_202386 (59469-59061) | |
| 182-762, gnl|panTro1|chr3 (126510845-126511249) | |
| 182-762, gnl|rheMac2|chr5 (101653917-101654321) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| lun (0.300978) | |
| gul (0.177588) | |
| fco (0.157208) | |
| spc (0.113366) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| lun (0.300978) | |
| gul (0.177588) | |
| fco (0.157208) | |
| spc (0.113366) |