Non-Coding RNA Search

Ss1.1-Pig4-TMW8040H23.3

Sequence:


               
               TGAAGACCAGTTTTTAAATTATGTGTTGGCAAGTTGCCTTATATTTAAAGAAAAAAAAGG
AAAAAAACACCTGATTGTGTTATGCCAAATGATAGCAACGTGAAGTCCTAATTTATTGTT
CCTAGTTATTTTCCTGCCGTCTGTGGACACTGGTACCTCCCTGACCCCAAGCCCCCAGAA
GCACCTGTGGCATCTGGTGCAACGCCTTCTCCCAGTGTGTTGGCCGTCATCTCACCCAGG
GCCCCCTTCCAGTTCTTGCTTCTGAGTTAAATTGAAAGAACACCGTTGTCTCCCCTCATC
ATCCCTTTGCTTGATCTCCAAGCCAGATATTTTTGCTGTAATTTTTTTCAATGCCTCTCC
CCAAAAGGTGAGCTGCCATTTTAGGAAAATGGGCCAGACACCAACTTGGGGGCTTCAAAT
CAAACCTCAAACCTTTCTCTTCCTGTGTAGGGGTGCAGGCCTCTGAAGCTCTCACTCCCA
CCCCTAGTCTGCATGGAAAATGTACTGTGACCTCCACCCCTTACCCCCTAACTACCCTTG
CCTTTGGTGTGAGATGTTTCCTATAGTTTACCCCGAGCTCCTCTTCCCCTCTGCCAGCCA
ACCCCCAACCAGCAATAAGGGTCCAAGCCGGGGCCTCCTATCCACACCCCTGCCTCCATC
CCACACTGCCCCTAGAAAATACCTGGATCCCCCGCCGTCCACACACTGTAGCATTCATTC
TCCATCTCCCTCATCTTCTCACCTGTGGTGGTTTATGGGTGTGATGGGGTTTTTAAGATT
ATTATAAACCAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGAAGACCAGTTTTTAAATTATGTGTTGGCAAGTTGCCTTATATTTAAAGAAAAAAAAGG
AAAAAAACACCTGATTGTGTTATGCCAAATGATAGCAACGTGAAGTCCTAATTTATTGTT
CCTAGTTATTTTCCTGCCGTCTGTGGACACTGGTACCTCCCTGACCCCAAGCCCCCAGAA
GCACCTGTGGCATCTGGTGCAACGCCTTCTCCCAGTGTGTTGGCCGTCATCTCACCCAGG
GCCCCCTTCCAGTTCTTGCTTCTGAGTTAAATTGAAAGAACACCGTTGTCTCCCCTCATC
ATCCCTTTGCTTGATCTCCAAGCCAGATATTTTTGCTGTAATTTTTTTCAATGCCTCTCC
CCAAAAGGTGAGCTGCCATTTTAGGAAAATGGGCCAGACACCAACTTGGGGGCTTCAAAT
CAAACCTCAAACCTTTCTCTTCCTGTGTAGGGGTGCAGGCCTCTGAAGCTCTCACTCCCA
CCCCTAGTCTGCATGGAAAATGTACTGTGACCTCCACCCCTTACCCCCTAACTACCCTTG
CCTTTGGTGTGAGATGTTTCCTATAGTTTACCCCGAGCTCCTCTTCCCCTCTGCCAGCCA
ACCCCCAACCAGCAATAAGGGTCCAAGCCGGGGCCTCCTATCCACACCCCTGCCTCCATC
CCACACTGCCCCTAGAAAATACCTGGATCCCCCGCCGTCCACACACTGTAGCATTCATTC
TCCATCTCCCTCATCTTCTCACCTGTGGTGGTTTATGGGTGTGATGGGGTTTTTAAGATT
ATTATAAACCAG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-792, gnl|bosTau2|chr19 (13713196-13712415)
               

               
               1-792, gnl|Hg17|chr17 (24107940-24107143)
               

               
               1-792, gnl|Mm7|chr11 (78238211-78238901)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-792, gnl|bosTau2|chr19 (13713196-13712415)
               

               
               1-792, gnl|Hg17|chr17 (24107940-24107143)
               

               
               1-792, gnl|Mm7|chr11 (78238211-78238901)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ecc (0.115035)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ecc (0.115035)

	1-792, gnl\|bosTau2\|chr19 (13713196-13712415)
	1-792, gnl\|Hg17\|chr17 (24107940-24107143)
	1-792, gnl\|Mm7\|chr11 (78238211-78238901)