Non-Coding RNA Search

Ss1.1-Pig4-TMW8040J14.5

Sequence:


               
               ATCATGTTTCCACCTTGGAGCATATTGGGTTGTTAGATTTATTTAGTACAATCGAGAGTA
ATAACCATAGTGTGTGGTGTCTTGAGATTGTTAGGATCCTATTGGGTTCCTTTTATATTT
TCAAGTTTTCATGAATATTTTGTCTGTTCACACTATCTTTTGTGTGAGGGTATTGAGGGA
CAAATTATTTCTTGGAGTGGAATTCCTGCATTTGGAGCCCCAACCAGGAAATGAAATATA
TTAGATATAGATAGCCTCACGGTAGCTTTTATGAAAAGAACTTGTCTACTGTGTTCACGT
AATTTCTCAAGTAGGAACTGTTTTATCTTGGGTATAGCTGACTTTATATGTAGCATAACT
GCCTTAAATCTTTTTAGTAGGAAATAATATAATGTGTATGTATGGATTTATATATACACA
AACACAGGAAAAGAAGCTTAACAGAAGGGGTTGTTTATCTGCATACATTTGAACGGTGTT
CAATGATTCTGTTGTTCAGATCTCAGTGAAAATTTTTTAATTTGCTTGCAGACATTTTCC
TCTCATGGACAGACCATCAAAGTAAATTTTTTATTCTGCTGGAGTCCTAACTTGGTGGTT
CAGTTAGTAAGCCATTTTTCAGCAGCGTGACAATTGAGGGTCATAACTGAAATTCATTAG
CATCCTCCCCCACCCCCAAAAAAAGCTCGATACTGACTTACAGTTACTTTTCTTTTTTTT
TTTTAAATGATGTTAGCTCGTGTGCCCTGCCCTACACTTGTCCACCTGGCATAAGATTTC
TGTTTAGGATACCCTGAGAAGTACTGCTACGAGGTCAAATTTTCTGTATTTAAGGGTAGC
CTGAAGATAACTTTCTTAGCCATGCTTAGCAGAAATGGATTTTCCAAAGTTCTGTGGGCC
ATTTCTGATTCTCAGAGGATCTGACCAGAGTGTATCAGCCTAACTAAGTTAACTTCAGTG
TTAGTTGGTTTGCTGCCATGAAATGCCTAATAGACCCAAAAGTTCAACATTACCGCTAAG
GATGGGAGTAGGGCTCATTAACTTCACACAAAGGACTTTTAGATTTTTCTCCAACAAAAT
TTTCCAAAAATGATATTCTTCTAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATCATGTTTCCACCTTGGAGCATATTGGGTTGTTAGATTTATTTAGTACAATCGAGAGTA
ATAACCATAGTGTGTGGTGTCTTGAGATTGTTAGGATCCTATTGGGTTCCTTTTATATTT
TCAAGTTTTCATGAATATTTTGTCTGTTCACACTATCTTTTGTGTGAGGGTATTGAGGGA
CAAATTATTTCTTGGAGTGGAATTCCTGCATTTGGAGCCCCAACCAGGAAATGAAATATA
TTAGATATAGATAGCCTCACGGTAGCTTTTATGAAAAGAACTTGTCTACTGTGTTCACGT
AATTTCTCAAGTAGGAACTGTTTTATCTTGGGTATAGCTGACTTTATATGTAGCATAACT
GCCTTAAATCTTTTTAGTAGGAAATAATATAATGTGTATGTATGGATTTATATATACACA
AACACAGGAAAAGAAGCTTAACAGAAGGGGTTGTTTATCTGCATACATTTGAACGGTGTT
CAATGATTCTGTTGTTCAGATCTCAGTGAAAATTTTTTAATTTGCTTGCAGACATTTTCC
TCTCATGGACAGACCATCAAAGTAAATTTTTTATTCTGCTGGAGTCCTAACTTGGTGGTT
CAGTTAGTAAGCCATTTTTCAGCAGCGTGACAATTGAGGGTCATAACTGAAATTCATTAG
CATCCTCCCCCACCCCCAAAAAAAGCTCGATACTGACTTACAGTTACTTTTCTTTTTTTT
TTTTAAATGATGTTAGCTCGTGTGCCCTGCCCTACACTTGTCCACCTGGCATAAGATTTC
TGTTTAGGATACCCTGAGAAGTACTGCTACGAGGTCAAATTTTCTGTATTTAAGGGTAGC
CTGAAGATAACTTTCTTAGCCATGCTTAGCAGAAATGGATTTTCCAAAGTTCTGTGGGCC
ATTTCTGATTCTCAGAGGATCTGACCAGAGTGTATCAGCCTAACTAAGTTAACTTCAGTG
TTAGTTGGTTTGCTGCCATGAAATGCCTAATAGACCCAAAAGTTCAACATTACCGCTAAG
GATGGGAGTAGGGCTCATTAACTTCACACAAAGGACTTTTAGATTTTTCTCCAACAAAAT
TTTCCAAAAATGATATTCTTCTAC

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               7-1011, gnl|bosTau2|chr24 (37809460-37810483)
               

               
               7-1011, gnl|Hg17|chr18 (43617387-43616380)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               7-1011, gnl|bosTau2|chr24 (37809460-37810483)
               

               
               7-1011, gnl|Hg17|chr18 (43617387-43616380)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ece (0.229305)
               

               
               cbl (0.114797)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ece (0.229305)
               

               
               cbl (0.114797)

	7-1011, gnl\|bosTau2\|chr24 (37809460-37810483)
	7-1011, gnl\|Hg17\|chr18 (43617387-43616380)