Non-Coding RNA Search

Ss1.1-Pig4-TMW8040J20.5

Sequence:


               
               CACACAGGTTGAACACCGTTATTGACAGCGACAAGATAATGGTTTTGGATGCGGGGAGAC
TGAAAGAATATGATGAGCCATATGTTTTGCTGCAAAATAGAGACAGCCTATTTTACAAGA
TGGTGCAACAACTGGGCAAGGCTGAGGCCGCTGCCCTCACTGAAACAGCAAAACAGGTGT
ATTTCAAGAGGAATTATCCAGATATCACTCAGAATGGCCCCGTGGTAATGAACGCTTCCA
ATGGACAGCCCTCAGCCTTCACAGTTTTTGAGACAGCCCTGTGATCCTGCCAGAACGTCA
CGTCTACTCCAAAGGCATAGTCTCCGATAGTTTTTGCACTGTGTAAACTACATTTTACTT
TTTCTACACTAGCAACACATATTTCACGTACAAGATGTTAGTTTACTTGGATTTTTTTCC
AGCTTCACCCGTTGATTTCAAGCTCTCTCACAAAGTGATGCATTGTTTTTATTTGTATGT
TACACTTTTTTGTTCTCATCCAACTCAGAGGTGCAGGCCACCAGTACAGCTGTCTACCAG
GTTTTGTGCCTTAATAGACTCCAGAGCCAAAGCTCATTTTTTCTAAGATATATGACAGAG
TTGTCACAGAAGTTTTTTTACTCCCCTCCCCCAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CACACAGGTTGAACACCGTTATTGACAGCGACAAGATAATGGTTTTGGATGCGGGGAGAC
TGAAAGAATATGATGAGCCATATGTTTTGCTGCAAAATAGAGACAGCCTATTTTACAAGA
TGGTGCAACAACTGGGCAAGGCTGAGGCCGCTGCCCTCACTGAAACAGCAAAACAGGTGT
ATTTCAAGAGGAATTATCCAGATATCACTCAGAATGGCCCCGTGGTAATGAACGCTTCCA
ATGGACAGCCCTCAGCCTTCACAGTTTTTGAGACAGCCCTGTGATCCTGCCAGAACGTCA
CGTCTACTCCAAAGGCATAGTCTCCGATAGTTTTTGCACTGTGTAAACTACATTTTACTT
TTTCTACACTAGCAACACATATTTCACGTACAAGATGTTAGTTTACTTGGATTTTTTTCC
AGCTTCACCCGTTGATTTCAAGCTCTCTCACAAAGTGATGCATTGTTTTTATTTGTATGT
TACACTTTTTTGTTCTCATCCAACTCAGAGGTGCAGGCCACCAGTACAGCTGTCTACCAG
GTTTTGTGCCTTAATAGACTCCAGAGCCAAAGCTCATTTTTTCTAAGATATATGACAGAG
TTGTCACAGAAGTTTTTTTACTCCCCTCCCCCAAAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61813832|ref|XP_602145.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61813832|ref|XP_602145.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               174-618, gnl|bosTau2|chr12 (37199442-37198997)
               

               
               174-618, gnl|Hg17|chr13 (94471940-94471490)
               

               
               174-618, gnl|Mm7|chr14 (112886690-112886235)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               174-618, gnl|bosTau2|chr12 (37199442-37198997)
               

               
               174-618, gnl|Hg17|chr13 (94471940-94471490)
               

               
               174-618, gnl|Mm7|chr14 (112886690-112886235)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               kid (0.129735)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               kid (0.129735)

	174-618, gnl\|bosTau2\|chr12 (37199442-37198997)
	174-618, gnl\|Hg17\|chr13 (94471940-94471490)
	174-618, gnl\|Mm7\|chr14 (112886690-112886235)