Non-Coding RNA Search

Ss1.1-Pig4-TMW8040K05.3

Sequence:


               
               GATGCAGACACGGATGAGGAGAACGCTCTGTCCCCAGAAACATGCTATGAGTGCAAAATC
AATGGCTACTCTAAGAAGGAGAGCAGACAGAAGAGAAGTCTTCATGAACCCAGACCCACT
GCCGGTGAACAGATCAGCCTGGAGAGTGTCGACATGGACAGCCCTGTGAAAATGAAGTTC
AATCTTTCTGGCCTTGGTTCTAAGGAGCACATTCTAGAACTCATGCCCGCCATCGAGCCG
CTCAACAACCACATCCGCTACGTCATCTCCCAAGGGAATGATGACGGCACCTTCCGCATC
CACCAAAAGAATGGGCTCAGCTACTTGCACACGGCCAAGAGGAAGCTGGTGCCTGGCACA
TACACACTGGAAATCACTAGCATCTCTCTCTATAAGAAGAAGGAGCTTAAGAAACTGGAA
GACAGCAACGAGGACGACTACCTCCTAGGGGAGCTCGGGGAAGCTCTCAGAATGAGGCTG
CAGATTCAACTCTATTAACCCCTTGGTAGACTTGGTTCCAGGCTCAAATCCCCGCACAGC
CAGCCTTCAGAAGCCTTTGAGAAATCAATGACTAATTTTAAAGAGGAAAAAAAAAAAAAA
GACGTTTGCTTCTTTCCTCCCTGTCTCGGACTTCAGAATGTTGACCCTCACAGGGAGGGC
TGATTTAGACTGGTGTGGCCAAAGATTTGAGTACAAAGGCAACCGTGGTTACTGTATTTT
TTTATATAACTTCACTTTAAAATATATTAAAAAAAAAAAAAACCTAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATGCAGACACGGATGAGGAGAACGCTCTGTCCCCAGAAACATGCTATGAGTGCAAAATC
AATGGCTACTCTAAGAAGGAGAGCAGACAGAAGAGAAGTCTTCATGAACCCAGACCCACT
GCCGGTGAACAGATCAGCCTGGAGAGTGTCGACATGGACAGCCCTGTGAAAATGAAGTTC
AATCTTTCTGGCCTTGGTTCTAAGGAGCACATTCTAGAACTCATGCCCGCCATCGAGCCG
CTCAACAACCACATCCGCTACGTCATCTCCCAAGGGAATGATGACGGCACCTTCCGCATC
CACCAAAAGAATGGGCTCAGCTACTTGCACACGGCCAAGAGGAAGCTGGTGCCTGGCACA
TACACACTGGAAATCACTAGCATCTCTCTCTATAAGAAGAAGGAGCTTAAGAAACTGGAA
GACAGCAACGAGGACGACTACCTCCTAGGGGAGCTCGGGGAAGCTCTCAGAATGAGGCTG
CAGATTCAACTCTATTAACCCCTTGGTAGACTTGGTTCCAGGCTCAAATCCCCGCACAGC
CAGCCTTCAGAAGCCTTTGAGAAATCAATGACTAATTTTAAAGAGGAAAAAAAAAAAAAA
GACGTTTGCTTCTTTCCTCCCTGTCTCGGACTTCAGAATGTTGACCCTCACAGGGAGGGC
TGATTTAGACTGGTGTGGCCAAAGATTTGAGTACAAAGGCAACCGTGGTTACTGTATTTT
TTTATATAACTTCACTTTAAAATATATTAAAAAAAAAAAAAACCTAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               128-759, gnl|bosTau2|chr7 (22843473-22842844)
               

               
               128-759, gnl|Hg17|chr5 (127623416-127622785)
               

               
               128-759, gnl|Mm7|chr18 (58389901-58389212)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               128-759, gnl|bosTau2|chr7 (22843473-22842844)
               

               
               128-759, gnl|Hg17|chr5 (127623416-127622785)
               

               
               128-759, gnl|Mm7|chr18 (58389901-58389212)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               che (0.136314)
               

               
               eru (0.120048)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               che (0.136314)
               

               
               eru (0.120048)

	128-759, gnl\|bosTau2\|chr7 (22843473-22842844)
	128-759, gnl\|Hg17\|chr5 (127623416-127622785)
	128-759, gnl\|Mm7\|chr18 (58389901-58389212)