Non-Coding RNA Search

Ss1.1-Pig4-TMW8040K09.3

Sequence:


               
               TTTTGGGGGATTCAGAAAAGGCTGACATTGTATGTGAGGGTAGATAATTGAAAGGATACA
TATTAATTATTATAATACAGTAAATTAATAACTGTCTTTCTTGGTGTTGTGATGTTAAAA
TATGCACAGAGAATTGTGACTATATGCATGTGTTAAGGATTTTTTTCCCCCAGGTGGACA
GTAGCAAAGAATCAGCTGAAGCAGCTTGTGATATATTATCACAACTTGTGAATTGCTCTT
TAAAAACACTTGGGCTTATTTCAACTGCTCGGCCAAGCTTTATGGATTTACCAAAGGTAT
GATGGTTTTGTTCACTGACAGTCGTGTTTGTAAACTCCAAATCCTTATCCTCGCTTAAGA
TAGATGATACCCCAGTAGATGATCCATCCCTCAAAGTACTAGTGGCCAACAACAGTGATA
CGCTCAAGCTGCTGAAAATGAGCAGCTGTCCTCATGTCTCTCCAGCAGGTATCCTCTGTG
TGGCAGATCAGTGTCATGGCTTACGTGAGCTGGCCCTGAATTACCATTTGTTAAGTGACG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTGGGGGATTCAGAAAAGGCTGACATTGTATGTGAGGGTAGATAATTGAAAGGATACA
TATTAATTATTATAATACAGTAAATTAATAACTGTCTTTCTTGGTGTTGTGATGTTAAAA
TATGCACAGAGAATTGTGACTATATGCATGTGTTAAGGATTTTTTTCCCCCAGGTGGACA
GTAGCAAAGAATCAGCTGAAGCAGCTTGTGATATATTATCACAACTTGTGAATTGCTCTT
TAAAAACACTTGGGCTTATTTCAACTGCTCGGCCAAGCTTTATGGATTTACCAAAGGTAT
GATGGTTTTGTTCACTGACAGTCGTGTTTGTAAACTCCAAATCCTTATCCTCGCTTAAGA
TAGATGATACCCCAGTAGATGATCCATCCCTCAAAGTACTAGTGGCCAACAACAGTGATA
CGCTCAAGCTGCTGAAAATGAGCAGCTGTCCTCATGTCTCTCCAGCAGGTATCCTCTGTG
TGGCAGATCAGTGTCATGGCTTACGTGAGCTGGCCCTGAATTACCATTTGTTAAGTGACG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|27924314|gb|AAH44938.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|27924314|gb|AAH44938.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               5-313, gnl|bosTau2|chr12 (26184999-26185315)
               

               
               5-313, gnl|Hg17|chr13 (76491084-76490724)
               

               
               5-313, gnl|Mm7|chr14 (97525430-97525146)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-313, gnl|bosTau2|chr12 (26184999-26185315)
               

               
               5-313, gnl|Hg17|chr13 (76491084-76490724)
               

               
               5-313, gnl|Mm7|chr14 (97525430-97525146)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eep (0.122564)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)

	5-313, gnl\|bosTau2\|chr12 (26184999-26185315)
	5-313, gnl\|Hg17\|chr13 (76491084-76490724)
	5-313, gnl\|Mm7\|chr14 (97525430-97525146)