Non-Coding RNA Search

Ss1.1-Pig4-TMW8040M16.5

Sequence:


               
               CTCGGGTGGCTTGCTGAGTGCACACCCATCTACATACAATCTTTTGTCAAGTTCTTCATT
ATTGGAGTTACGGTTTTAGTGGTAGCGGTGCCAGAGGGTCTCCCCCTTGCCGTCACCATC
TCACTGGCGTACTCGGTCAAGAAAATGATGAAAGATAATAATTTAGTAAGGCATCTGGAT
GCTTGTGAAACCATGGGAAATGCTACAGCTATTTGTTCAGATAAAACAGGAACATTGACA
ATGAACAGGATGACAGTTGTTCAAGCCTACATAAATGAAAAACATTATAAAAAGATTCCT
GAACCAGAAGCTATTCCACCAAATATTTTATCCTATCTCGTAACAGGAATTTCTGTGAAT
TGTGCTTATACATCAAAAATATTGGTAAGGTTTCTTTAACAATTACTTCATATATGAAAA
TAATATTTTAGTTTGTAATAATTAGACTTATGTAGCTCTTTTTTGGGGGTGGGGGGTGCA
CACCTATGACATTTTGGAAGTTCCCAGGCTAAGGGTCAGATCAGAACTGCAGCTGCCGGC
CTGCACCACAGCCACAGCAATGCGGGATCTGACCCATATCTGTGACCTACACCACAATTC
ATGGCAACATCTAATCCTTAACCCACTGAGCATCCTGCATCCTCATGGGTACTAGTCAGG
TTCATTAACCTGCTGAGCCACAACAGGAACTCCTGTATGTAGTTATTAAGGCCTATCATT
ACTATCTATAAATTGAAGAAATTGAATTGTGCTAAATTTAAAGAAGGAATATGTCCATAT
ACTGTTTCTTTGGATGCATTTTGTGTTACTACTAAGGACATTTGATCAATAAATATAAAC
ATTTTGTTTACTAGTAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCGGGTGGCTTGCTGAGTGCACACCCATCTACATACAATCTTTTGTCAAGTTCTTCATT
ATTGGAGTTACGGTTTTAGTGGTAGCGGTGCCAGAGGGTCTCCCCCTTGCCGTCACCATC
TCACTGGCGTACTCGGTCAAGAAAATGATGAAAGATAATAATTTAGTAAGGCATCTGGAT
GCTTGTGAAACCATGGGAAATGCTACAGCTATTTGTTCAGATAAAACAGGAACATTGACA
ATGAACAGGATGACAGTTGTTCAAGCCTACATAAATGAAAAACATTATAAAAAGATTCCT
GAACCAGAAGCTATTCCACCAAATATTTTATCCTATCTCGTAACAGGAATTTCTGTGAAT
TGTGCTTATACATCAAAAATATTGGTAAGGTTTCTTTAACAATTACTTCATATATGAAAA
TAATATTTTAGTTTGTAATAATTAGACTTATGTAGCTCTTTTTTGGGGGTGGGGGGTGCA
CACCTATGACATTTTGGAAGTTCCCAGGCTAAGGGTCAGATCAGAACTGCAGCTGCCGGC
CTGCACCACAGCCACAGCAATGCGGGATCTGACCCATATCTGTGACCTACACCACAATTC
ATGGCAACATCTAATCCTTAACCCACTGAGCATCCTGCATCCTCATGGGTACTAGTCAGG
TTCATTAACCTGCTGAGCCACAACAGGAACTCCTGTATGTAGTTATTAAGGCCTATCATT
ACTATCTATAAATTGAAGAAATTGAATTGTGCTAAATTTAAAGAAGGAATATGTCCATAT
ACTGTTTCTTTGGATGCATTTTGTGTTACTACTAAGGACATTTGATCAATAAATATAAAC
ATTTTGTTTACTAGTAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               140-460, gnl|bosTau2|chr5 (12469950-12470268)
               

               
               140-460, gnl|Hg17|chr12 (88518038-88517724)
               

               
               140-460, gnl|Mm7|chr10 (98562225-98562511)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               140-460, gnl|bosTau2|chr5 (12469950-12470268)
               

               
               140-460, gnl|Hg17|chr12 (88518038-88517724)
               

               
               140-460, gnl|Mm7|chr10 (98562225-98562511)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eep (0.122564)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eep (0.122564)

	140-460, gnl\|bosTau2\|chr5 (12469950-12470268)
	140-460, gnl\|Hg17\|chr12 (88518038-88517724)
	140-460, gnl\|Mm7\|chr10 (98562225-98562511)