Ss1.1-Pig4-TMW8040M20.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCATCCCATTCGGAAGAGGAAGGAACAAAAGGTCCCGGACCCCCGGCTCTGACGGGGCGG GACCCGGAGCCTCGGTCCAGGTTAGATTAAGGAGGATATTTTCTTAGTGTGGACCGCTGC CTTTGGTAAGAACATGTCGTCCATCTTGCCATTCACTCCGCCAGTTGTGAAGAGACTGCT GGGATGGAAGAAGTCAGCTGGTGGATCTGGAGGAGCAGGTGGAGGAGAGCAGAATGGACA GGAAGAGAAGTGGTGTGAGAAAGCAGTTAAAAGTTTGGTGAAGAAGCTAAAGAAAACAGG ACGATTAGATGAGCTTGAGAAAGCCATCACCACTCAAAATTGTAATACTAAATGTGTTAC CATACCAAGCACTTGCTCTGAAATTTGGGGACTGAGTACACCAAATACGATAGATCAGTG GGATACAACAGGCCTTTACAGCTTCTCTGAACAAACCAGGTCCCTTGATGGTCGTCTTCA GGTATCTCATCGAAAAGGACTGCCACACGTAATCTATTGTCGATTATGGCGCTGGCCTGA TCTTCACAGTCATCATGAACTCAAAGCAATTGAAAACTGCGAATATGCTTTTAATCTTAA AAAGGATGAAGTATGTGTAAACCCTTACCACTACCAGAGAGTTGAGACACCAGTTTTGCC TCCAGTATTAGTGCCACGGCATACTGAGATCTTAACAGAACTACCACCTCTGGATGATTA TACCCACTCCATTCCAGAAAACAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCATCCCATTCGGAAGAGGAAGGAACAAAAGGTCCCGGACCCCCGGCTCTGACGGGGCGG GACCCGGAGCCTCGGTCCAGGTTAGATTAAGGAGGATATTTTCTTAGTGTGGACCGCTGC CTTTGGTAAGAACATGTCGTCCATCTTGCCATTCACTCCGCCAGTTGTGAAGAGACTGCT GGGATGGAAGAAGTCAGCTGGTGGATCTGGAGGAGCAGGTGGAGGAGAGCAGAATGGACA GGAAGAGAAGTGGTGTGAGAAAGCAGTTAAAAGTTTGGTGAAGAAGCTAAAGAAAACAGG ACGATTAGATGAGCTTGAGAAAGCCATCACCACTCAAAATTGTAATACTAAATGTGTTAC CATACCAAGCACTTGCTCTGAAATTTGGGGACTGAGTACACCAAATACGATAGATCAGTG GGATACAACAGGCCTTTACAGCTTCTCTGAACAAACCAGGTCCCTTGATGGTCGTCTTCA GGTATCTCATCGAAAAGGACTGCCACACGTAATCTATTGTCGATTATGGCGCTGGCCTGA TCTTCACAGTCATCATGAACTCAAAGCAATTGAAAACTGCGAATATGCTTTTAATCTTAA AAAGGATGAAGTATGTGTAAACCCTTACCACTACCAGAGAGTTGAGACACCAGTTTTGCC TCCAGTATTAGTGCCACGGCATACTGAGATCTTAACAGAACTACCACCTCTGGATGATTA TACCCACTCCATTCCAGAAAACAC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 224-369, gnl|bosTau2|chr10 (6441736-6441591) | |
| 224-369, gnl|Hg17|chr15 (65145607-65145752) | |
| 224-369, gnl|Mm7|chr9 (63786048-63785903) | |
| 457-663, gnl|bosTau2|chr10 (6342278-6342071) | |
| 457-663, gnl|canFam2|chr30 (34332147-34332376) | |
| 457-663, gnl|danRer3|chr18 (23927679-23927888) | |
| 457-663, gnl|dasNov1|scaffold_835 (127215-127440) | |
| 457-663, gnl|echTel1|scaffold_317384 (8930-8708) | |
| 457-663, gnl|fr1|chrUn (67840453-67840248) | |
| 457-663, gnl|galGal2|chr10 (19518656-19518873) | |
| 457-663, gnl|hg17|chr15 (65244255-65244485) | |
| 457-663, gnl|Hg17|chr15 (65244284-65244498) | |
| 457-663, gnl|loxAfr1|scaffold_2367 (30889-31118) | |
| 457-663, gnl|mm7|chr9 (63696427-63696197) | |
| 457-663, gnl|Mm7|chr9 (63696395-63696194) | |
| 457-663, gnl|monDom2|scaffold_12 (45207298-45207074) | |
| 457-663, gnl|oryCun1|scaffold_210508 (66935-67161) | |
| 457-663, gnl|panTro1|chr16_random (18169932-18169702) | |
| 457-663, gnl|rheMac2|chr7 (45735510-45735740) | |
| 457-663, gnl|rn3|chr8 (67860496-67860266) | |
| 457-663, gnl|tetNig1|chr13 (7691845-7692062) | |
| 457-663, gnl|xenTro1|scaffold_5 (25090-25306) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 224-369, gnl|bosTau2|chr10 (6441736-6441591) | |
| 224-369, gnl|Hg17|chr15 (65145607-65145752) | |
| 224-369, gnl|Mm7|chr9 (63786048-63785903) | |
| 457-663, gnl|bosTau2|chr10 (6342278-6342071) | |
| 457-663, gnl|canFam2|chr30 (34332147-34332376) | |
| 457-663, gnl|danRer3|chr18 (23927679-23927888) | |
| 457-663, gnl|dasNov1|scaffold_835 (127215-127440) | |
| 457-663, gnl|echTel1|scaffold_317384 (8930-8708) | |
| 457-663, gnl|fr1|chrUn (67840453-67840248) | |
| 457-663, gnl|galGal2|chr10 (19518656-19518873) | |
| 457-663, gnl|hg17|chr15 (65244255-65244485) | |
| 457-663, gnl|Hg17|chr15 (65244284-65244498) | |
| 457-663, gnl|loxAfr1|scaffold_2367 (30889-31118) | |
| 457-663, gnl|mm7|chr9 (63696427-63696197) | |
| 457-663, gnl|Mm7|chr9 (63696395-63696194) | |
| 457-663, gnl|monDom2|scaffold_12 (45207298-45207074) | |
| 457-663, gnl|oryCun1|scaffold_210508 (66935-67161) | |
| 457-663, gnl|panTro1|chr16_random (18169932-18169702) | |
| 457-663, gnl|rheMac2|chr7 (45735510-45735740) | |
| 457-663, gnl|rn3|chr8 (67860496-67860266) | |
| 457-663, gnl|tetNig1|chr13 (7691845-7692062) | |
| 457-663, gnl|xenTro1|scaffold_5 (25090-25306) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cki (0.165235) | |
| eru (0.120048) |