Ss1.1-Pig4-TMW8040M24.5
|
ATCTCAAAAGTTCACATTCAGAACTTCTGGAGGATTACTACCAAAGCGGAAGAATGCTTT
TGCGAATGTCTCAAGCTTTGGGCCGAATAGTTTTGGCTGGCCGTGAGATGACTAGATTGG
CCGGTTTTACTGCCCGGATTACGGAATTAATGCAAGTATTAAAGGATTTAAATCATGGCA
AATATGAGCGCACTATGGTCTCTCAGCAGGAAAAGGGTGCACAGGGCATTCCCTTGATAC
CTGGTGCTGGAGAAATCATCAATGCAGATAACATTATAAAATTTGATCATGTTCCTTTAG
CAACGCCAAATGGAGATATCTTGATCAGAGACCTTAATTTTGAAGTTCGATCTGGGGCCA
ACGTTCTAATTTGTGGTCCAAATGGCTGTGGGAAGAGTTCCCTTTTCCGAGTTCTTGGTG
AATTGTGGCCTCTTTTTGGGGGACGTCTGACTAAACCCGAGAGAGGAAAGTTATTTTATG
TTCCTCAGAGACCTTACATGACCCTTGGAACACTTCGAGACCAAGTGATCTACCCAGATG
GAAGAGAAGAGCAGAAGAAGAAGGGGATATCCGACCTCGTCCTGAAGGAGTACTTGGATA
ATGTCCAGCTGGGTCATATCCTTGAACGTGAAGGCGGCTGGGACAGTGTGCAGGACTGGA
TGGACGTGCTCAGTGGCGGAGAGAAGCAGAGAATGGCGATGGCAAGACTGTTTTATCACA
AGCCGCAGTTTGCCATTTTGGATGAGTGCACCAGCGCGGTGAGTGTGGACGTGGAAGACT
ACATTTACAGCCACTGCCGGAAGGTTGGAATCACCCTCTTCACTGTGTCACACAGGAAGT
CTCTTTGGAAGCACCATGAGTACTATCTGCATATGGATGGCAGAGGCAATTATGAATTCA
AACAGATAACCGAAGATACAGTTGAGTTTGGCTCTTAGAATCCGGAGAACTGTACTGTAC
CGGCTTCAGTGAAGTAATTACACAATACCATTAGACATACAAAGTACATTGTAAAATAAA
GTTGAACTTGTTTTTTGTTTTTTAAACAAAGCAACAAATTAACTAGATAATCGACAAGTT
GTTAAAACATTTCATATTATATAGGATATTGCTAATTGTGTATATGTTGGTTTAATTATT
AATATGTACTAAGAATGTCCTTATTCTTGTGGTTAAAAACCTGCCTAAATTAAATTGGGC
TTAAATCAGTGTAACCTGATTCATCCTGGGATGTAAACCATTTGAAGTCAGCTACTTTGA
CTTGTATGGCTCTGTGTTTTCCTTCAATGAAGAACC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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ATCTCAAAAGTTCACATTCAGAACTTCTGGAGGATTACTACCAAAGCGGAAGAATGCTTT
TGCGAATGTCTCAAGCTTTGGGCCGAATAGTTTTGGCTGGCCGTGAGATGACTAGATTGG
CCGGTTTTACTGCCCGGATTACGGAATTAATGCAAGTATTAAAGGATTTAAATCATGGCA
AATATGAGCGCACTATGGTCTCTCAGCAGGAAAAGGGTGCACAGGGCATTCCCTTGATAC
CTGGTGCTGGAGAAATCATCAATGCAGATAACATTATAAAATTTGATCATGTTCCTTTAG
CAACGCCAAATGGAGATATCTTGATCAGAGACCTTAATTTTGAAGTTCGATCTGGGGCCA
ACGTTCTAATTTGTGGTCCAAATGGCTGTGGGAAGAGTTCCCTTTTCCGAGTTCTTGGTG
AATTGTGGCCTCTTTTTGGGGGACGTCTGACTAAACCCGAGAGAGGAAAGTTATTTTATG
TTCCTCAGAGACCTTACATGACCCTTGGAACACTTCGAGACCAAGTGATCTACCCAGATG
GAAGAGAAGAGCAGAAGAAGAAGGGGATATCCGACCTCGTCCTGAAGGAGTACTTGGATA
ATGTCCAGCTGGGTCATATCCTTGAACGTGAAGGCGGCTGGGACAGTGTGCAGGACTGGA
TGGACGTGCTCAGTGGCGGAGAGAAGCAGAGAATGGCGATGGCAAGACTGTTTTATCACA
AGCCGCAGTTTGCCATTTTGGATGAGTGCACCAGCGCGGTGAGTGTGGACGTGGAAGACT
ACATTTACAGCCACTGCCGGAAGGTTGGAATCACCCTCTTCACTGTGTCACACAGGAAGT
CTCTTTGGAAGCACCATGAGTACTATCTGCATATGGATGGCAGAGGCAATTATGAATTCA
AACAGATAACCGAAGATACAGTTGAGTTTGGCTCTTAGAATCCGGAGAACTGTACTGTAC
CGGCTTCAGTGAAGTAATTACACAATACCATTAGACATACAAAGTACATTGTAAAATAAA
GTTGAACTTGTTTTTTGTTTTTTAAACAAAGCAACAAATTAACTAGATAATCGACAAGTT
GTTAAAACATTTCATATTATATAGGATATTGCTAATTGTGTATATGTTGGTTTAATTATT
AATATGTACTAAGAATGTCCTTATTCTTGTGGTTAAAAACCTGCCTAAATTAAATTGGGC
TTAAATCAGTGTAACCTGATTCATCCTGGGATGTAAACCATTTGAAGTCAGCTACTTTGA
CTTGTATGGCTCTGTGTTTTCCTTCAATGAAGAACC
|
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gi|61875890|ref|XP_589277.1| |
Protein identifier
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gi|61875890|ref|XP_589277.1| |
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579-698, gnl|bosTau2|chr3 (39342304-39342185) |
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579-698, gnl|canFam2|chr6 (57810301-57810160) |
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579-698, gnl|danRer3|chr13 (12092838-12092965) |
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579-698, gnl|dasNov1|scaffold_190562 (598-749) |
|
579-698, gnl|echTel1|scaffold_311376 (12818-12675) |
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579-698, gnl|galGal2|chr8 (13904751-13904612) |
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579-698, gnl|hg17|chr1 (94677059-94677200) |
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579-698, gnl|Hg17|chr1 (94677072-94677191) |
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579-698, gnl|loxAfr1|scaffold_3872 (37388-37248) |
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579-698, gnl|mm7|chr3 (121537545-121537403) |
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579-698, gnl|Mm7|chr3 (121537529-121537410) |
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579-698, gnl|monDom2|scaffold_0 (26227148-26227007) |
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579-698, gnl|oryCun1|scaffold_204264 (48130-48271) |
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579-698, gnl|panTro1|chr1 (93662977-93663118) |
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579-698, gnl|rheMac2|chr1 (97505927-97506068) |
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579-698, gnl|rn3|chr2 (218369425-218369283) |
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579-698, gnl|tetNig1|chrUn_random (51993773-51993647) |
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579-698, gnl|xenTro1|scaffold_36 (1877160-1877019) |
| |
|
854-1188, gnl|bosTau2|chr3 (39332535-39332201) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
579-698, gnl|bosTau2|chr3 (39342304-39342185) |
|
579-698, gnl|canFam2|chr6 (57810301-57810160) |
|
579-698, gnl|danRer3|chr13 (12092838-12092965) |
|
579-698, gnl|dasNov1|scaffold_190562 (598-749) |
|
579-698, gnl|echTel1|scaffold_311376 (12818-12675) |
|
579-698, gnl|galGal2|chr8 (13904751-13904612) |
|
579-698, gnl|hg17|chr1 (94677059-94677200) |
|
579-698, gnl|Hg17|chr1 (94677072-94677191) |
|
579-698, gnl|loxAfr1|scaffold_3872 (37388-37248) |
|
579-698, gnl|mm7|chr3 (121537545-121537403) |
|
579-698, gnl|Mm7|chr3 (121537529-121537410) |
|
579-698, gnl|monDom2|scaffold_0 (26227148-26227007) |
|
579-698, gnl|oryCun1|scaffold_204264 (48130-48271) |
|
579-698, gnl|panTro1|chr1 (93662977-93663118) |
|
579-698, gnl|rheMac2|chr1 (97505927-97506068) |
|
579-698, gnl|rn3|chr2 (218369425-218369283) |
|
579-698, gnl|tetNig1|chrUn_random (51993773-51993647) |
|
579-698, gnl|xenTro1|scaffold_36 (1877160-1877019) |
| |
|
854-1188, gnl|bosTau2|chr3 (39332535-39332201) |
|
fat (0.294855) |
|
pan (0.23596) |
|
cty (0.20816) |
|
hea (0.204499) |
|
mgm (0.180343) |
|
sin (0.174948) |
|
mcp (0.170648) |
|
cut (0.169924) |
|
csp (0.161186) |
|
ski (0.146735) |
|
liv (0.146284) |
|
hyp (0.142837) |
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lnt (0.142308) |
|
cst (0.140036) |
|
pla (0.133672) |
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lyg (0.133103) |
|
sug (0.127291) |
|
tra (0.123092) |
|
cbl (0.114797) |
|
spc (0.113366) |
|
fat (0.294855) |
|
pan (0.23596) |
|
cty (0.20816) |
|
hea (0.204499) |
|
mgm (0.180343) |
|
sin (0.174948) |
|
mcp (0.170648) |
|
cut (0.169924) |
|
csp (0.161186) |
|
ski (0.146735) |
|
liv (0.146284) |
|
hyp (0.142837) |
|
lnt (0.142308) |
|
cst (0.140036) |
|
pla (0.133672) |
|
lyg (0.133103) |
|
sug (0.127291) |
|
tra (0.123092) |
|
cbl (0.114797) |
|
spc (0.113366) |
