Ss1.1-Pig4-TMW8040P03.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TAAACCCACATACTCTTGTTGTCTGCGGCACTTACTCTATTGGAAAAGAGAAAGTCTTCT TAGCCATTGCTGATGTTTTAGGTTCAAAAGTTGGCATGTCCAAAGAAAAATATAACACAT TACGGTGCCTCAATATACCAGAAATTAATTCCTTCATCACTACAGACATGTGCAATTCAC TCGTTCACCTTCTCCCAATGATGCAAATTAATTTTAAGGGTTTACAGAATCATCTGAAGA AGTTTGGTGGGAAATACAATCAGATTTTGGCTTTTCGACCTACAGGATGGACGCATTCTA ATAAGTTAACTAGCATAGCAGATGTTCTTCCCCAGACCAAGGGAAACATTTCAATATATG GGATTCCTTATAGTGAACACAGCAGCTACCCAGAGATGAAACGTTTCGTTCAGTGGCTGA AGCCGCGGATAATCATACCTACTGTGAACGTTGGCACTGTGAAATCTAGGAGAACGATGG AGAAATATTTTAAAGAGTGGCAATTGGAAGCTGGATGTTGATGTTACCTCAGTAGTTAAG TAACTCAGGTCTAACTTAGTAGTTAAATCTTTAGTGATATGAAATACCTGTATGAAACTC ATACAGCTTATTTTCTCATTTATGTTTGAATAACATGTTTATGGTCCAGAGTGTCTGTCA GCATCATCAGTAATTGAGACTGATCTCCCTGGTACTCTTGGTTCTTGCCCTTCCCTATGG AGGCAGCTGTAGTCTGCATCCAGCCTTAGGAGGGGAAATAAGGGCAGGTATCAAAGGATT CATGATAATGAATAAACTAGATTGAAAGCATTATATGTAAGTAAGTGTGCATCTTTAAAA TTATTTAATATGGAGCATATTTTTTATGAGATGAAACTTTTATATGATATATATACTAAA TAAAAGTTAATTTTAAATTTGAAAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TAAACCCACATACTCTTGTTGTCTGCGGCACTTACTCTATTGGAAAAGAGAAAGTCTTCT TAGCCATTGCTGATGTTTTAGGTTCAAAAGTTGGCATGTCCAAAGAAAAATATAACACAT TACGGTGCCTCAATATACCAGAAATTAATTCCTTCATCACTACAGACATGTGCAATTCAC TCGTTCACCTTCTCCCAATGATGCAAATTAATTTTAAGGGTTTACAGAATCATCTGAAGA AGTTTGGTGGGAAATACAATCAGATTTTGGCTTTTCGACCTACAGGATGGACGCATTCTA ATAAGTTAACTAGCATAGCAGATGTTCTTCCCCAGACCAAGGGAAACATTTCAATATATG GGATTCCTTATAGTGAACACAGCAGCTACCCAGAGATGAAACGTTTCGTTCAGTGGCTGA AGCCGCGGATAATCATACCTACTGTGAACGTTGGCACTGTGAAATCTAGGAGAACGATGG AGAAATATTTTAAAGAGTGGCAATTGGAAGCTGGATGTTGATGTTACCTCAGTAGTTAAG TAACTCAGGTCTAACTTAGTAGTTAAATCTTTAGTGATATGAAATACCTGTATGAAACTC ATACAGCTTATTTTCTCATTTATGTTTGAATAACATGTTTATGGTCCAGAGTGTCTGTCA GCATCATCAGTAATTGAGACTGATCTCCCTGGTACTCTTGGTTCTTGCCCTTCCCTATGG AGGCAGCTGTAGTCTGCATCCAGCCTTAGGAGGGGAAATAAGGGCAGGTATCAAAGGATT CATGATAATGAATAAACTAGATTGAAAGCATTATATGTAAGTAAGTGTGCATCTTTAAAA TTATTTAATATGGAGCATATTTTTTATGAGATGAAACTTTTATATGATATATATACTAAA TAAAAGTTAATTTTAAATTTGAAAAAAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 28 entry(ies) | More info |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
| 61-219, gnl|bosTau2|chr26 (22739821-22739979) | |
| 61-219, gnl|canFam2|chr28 (27710644-27710870) | |
| 61-219, gnl|danRer3|chr12 (29877482-29877278) | |
| 61-219, gnl|dasNov1|scaffold_133842 (3443-3195) | |
| 61-219, gnl|echTel1|scaffold_308214 (28788-29001) | |
| 61-219, gnl|fr1|chrUn (114420335-114420114) | |
| 61-219, gnl|galGal2|chr6 (26610288-26610501) | |
| 61-219, gnl|hg17|chr10 (115591129-115591354) | |
| 61-219, gnl|Hg17|chr10 (115591312-115591154) | |
| 61-219, gnl|loxAfr1|scaffold_12681 (20156-19939) | |
| 61-219, gnl|mm7|chr19 (56453006-56453231) | |
| 61-219, gnl|Mm7|chr19 (56453189-56453031) | |
| 61-219, gnl|monDom2|scaffold_14 (48315786-48315563) | |
| 61-219, gnl|oryCun1|scaffold_61108 (454-678) | |
| 61-219, gnl|panTro1|chr8 (117751463-117751688) | |
| 61-219, gnl|rheMac2|chr9 (113505304-113505529) | |
| 61-219, gnl|rn3|chr1 (263041700-263041907) | |
| 360-921, gnl|bosTau2|chr26 (22746732-22747337) | |
| 360-921, gnl|canFam2|chr28 (27704735-27705239) | |
| 360-921, gnl|echTel1|scaffold_308214 (23584-24099) | |
| 360-921, gnl|Hg17|chr10 (115585062-115584474) | |
| 360-921, gnl|hg17|chr8 (37184503-37185022) | |
| 360-921, gnl|loxAfr1|scaffold_12681 (25684-25165) | |
| 360-921, gnl|mm7|chr19 (56445073-56445480) | |
| 360-921, gnl|oryCun1|scaffold_203812 (7959-7486) | |
| 360-921, gnl|panTro1|chr7 (38405060-38405571) | |
| 360-921, gnl|rheMac2|chr8 (37645007-37645534) | |
| 360-921, gnl|rn3|chr1 (263033224-263033625) |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 61-219, gnl|bosTau2|chr26 (22739821-22739979) | |
| 61-219, gnl|canFam2|chr28 (27710644-27710870) | |
| 61-219, gnl|danRer3|chr12 (29877482-29877278) | |
| 61-219, gnl|dasNov1|scaffold_133842 (3443-3195) | |
| 61-219, gnl|echTel1|scaffold_308214 (28788-29001) | |
| 61-219, gnl|fr1|chrUn (114420335-114420114) | |
| 61-219, gnl|galGal2|chr6 (26610288-26610501) | |
| 61-219, gnl|hg17|chr10 (115591129-115591354) | |
| 61-219, gnl|Hg17|chr10 (115591312-115591154) | |
| 61-219, gnl|loxAfr1|scaffold_12681 (20156-19939) | |
| 61-219, gnl|mm7|chr19 (56453006-56453231) | |
| 61-219, gnl|Mm7|chr19 (56453189-56453031) | |
| 61-219, gnl|monDom2|scaffold_14 (48315786-48315563) | |
| 61-219, gnl|oryCun1|scaffold_61108 (454-678) | |
| 61-219, gnl|panTro1|chr8 (117751463-117751688) | |
| 61-219, gnl|rheMac2|chr9 (113505304-113505529) | |
| 61-219, gnl|rn3|chr1 (263041700-263041907) | |
| 360-921, gnl|bosTau2|chr26 (22746732-22747337) | |
| 360-921, gnl|canFam2|chr28 (27704735-27705239) | |
| 360-921, gnl|echTel1|scaffold_308214 (23584-24099) | |
| 360-921, gnl|Hg17|chr10 (115585062-115584474) | |
| 360-921, gnl|hg17|chr8 (37184503-37185022) | |
| 360-921, gnl|loxAfr1|scaffold_12681 (25684-25165) | |
| 360-921, gnl|mm7|chr19 (56445073-56445480) | |
| 360-921, gnl|oryCun1|scaffold_203812 (7959-7486) | |
| 360-921, gnl|panTro1|chr7 (38405060-38405571) | |
| 360-921, gnl|rheMac2|chr8 (37645007-37645534) | |
| 360-921, gnl|rn3|chr1 (263033224-263033625) |
| Expressed library(ies): 8 entry(ies) | More info |
| Expressed library(ies): 8 entry(ies) | Help | Less info |
| thg (0.253582) | |
| hea (0.204499) | |
| cmu (0.186393) | |
| fco (0.157208) | |
| lin (0.145603) | |
| lnt (0.142308) | |
| pla (0.133672) | |
| spc (0.113366) |
| Expressed library(ies): 8 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| thg (0.253582) | |
| hea (0.204499) | |
| cmu (0.186393) | |
| fco (0.157208) | |
| lin (0.145603) | |
| lnt (0.142308) | |
| pla (0.133672) | |
| spc (0.113366) |