Ss1.1-Pig4-TMW8041D12.3
Sequence: | Distiller database | More info |
Sequence: | Distiller database | Help | Less info |
TTCATGCCGAAAATCTAATGGCTAATGCAAAACTGGCATGTTTTAAACTACTCGGGGGAG GGGGGGAGAGCTACTTTTAATACCAGCCTTTTAGATTTCAAAGATTTTGATGAGAAATAA TAGTACACAGTATCAGCATTGACAAAACATTGAAAGTTCCTTTCTATAAAATATAAAATA CTCATTAAGTCCAAGTCAGGCATGGGAAATCAGTGTTTAAAATTGAATGTTTTGTGTTTT ATATTTATATTATAATGTTCAAAATGCAAGTCTAACATTTTAATATTTGTCAAGTTGCTT TTACAAAAGTTAAATCCTAAATTTCTAAGCTTTCTTTGTTCGTATGTCCTTGTACTTTTT CAAATCACTGTAAGCAATTGCTTGTATATTGAAAACCCAGATCTATTTTGTAGATGTTGC GGTGTCATCAGAGACAAATATTCTGTGAAGTAGCTGGGCAGGTCCACACCTTTATCCTTT TATCTTTGGAGTAATCATGGTTTAGTCTCTTAGATTGCTGCCCCATCGGTCCAACAGTGT ACCAGCATATTCTCTGTCATCAAGACGCTGGCCAAATATTATTCTTAATTGATGTTCAGA GCATGCATTACATTGTTACAGCTGGTTTAGTGATGACATGTCATCATAAGAATGCATGAG ATCTTATACCACATTTATAAAACATGCTTTTTTTGTTATATTCTGTCCTCTCAGTCAAGC ATTAGAAATGATGGTACCTTGATACTTGTGCATAAAACCAGAATTACGTCAAAAGAATTT TAATTCATGTATGAAAATGCATCATACATCAGAATCATTTGAACAGTATTACTTCCGAAT AAAATGGAAAGC |
Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
TTCATGCCGAAAATCTAATGGCTAATGCAAAACTGGCATGTTTTAAACTACTCGGGGGAG GGGGGGAGAGCTACTTTTAATACCAGCCTTTTAGATTTCAAAGATTTTGATGAGAAATAA TAGTACACAGTATCAGCATTGACAAAACATTGAAAGTTCCTTTCTATAAAATATAAAATA CTCATTAAGTCCAAGTCAGGCATGGGAAATCAGTGTTTAAAATTGAATGTTTTGTGTTTT ATATTTATATTATAATGTTCAAAATGCAAGTCTAACATTTTAATATTTGTCAAGTTGCTT TTACAAAAGTTAAATCCTAAATTTCTAAGCTTTCTTTGTTCGTATGTCCTTGTACTTTTT CAAATCACTGTAAGCAATTGCTTGTATATTGAAAACCCAGATCTATTTTGTAGATGTTGC GGTGTCATCAGAGACAAATATTCTGTGAAGTAGCTGGGCAGGTCCACACCTTTATCCTTT TATCTTTGGAGTAATCATGGTTTAGTCTCTTAGATTGCTGCCCCATCGGTCCAACAGTGT ACCAGCATATTCTCTGTCATCAAGACGCTGGCCAAATATTATTCTTAATTGATGTTCAGA GCATGCATTACATTGTTACAGCTGGTTTAGTGATGACATGTCATCATAAGAATGCATGAG ATCTTATACCACATTTATAAAACATGCTTTTTTTGTTATATTCTGTCCTCTCAGTCAAGC ATTAGAAATGATGGTACCTTGATACTTGTGCATAAAACCAGAATTACGTCAAAAGAATTT TAATTCATGTATGAAAATGCATCATACATCAGAATCATTTGAACAGTATTACTTCCGAAT AAAATGGAAAGC |
Aligned organism(s): 25 entry(ies) | More info |
Aligned organism(s): 25 entry(ies) | Help | Less info |
61-511, gnl|bosTau2|chr2 (29520893-29521335) | |
61-511, gnl|Hg17|chr2 (152483802-152483360) | |
61-511, gnl|Mm7|chr2 (52408315-52407906) | |
733-848, gnl|bosTau2|chr2 (29521543-29521654) | |
733-848, gnl|canFam2|chr19 (55985728-55985664) | |
733-848, gnl|canFam2|chr19 (55985287-55985725) | |
733-848, gnl|echTel1|scaffold_295116 (2258-2813) | |
733-848, gnl|hg17|chr2 (152482638-152483108) | |
733-848, gnl|Hg17|chr2 (152483127-152483019) | |
733-848, gnl|hg17|chr22 (23413605-23413671) | |
733-848, gnl|loxAfr1|scaffold_1142 (28978-28909) | |
733-848, gnl|loxAfr1|scaffold_1142 (28476-28975) | |
733-848, gnl|mm7|chr2 (52407638-52407580) | |
733-848, gnl|mm7|chr2 (52407184-52407635) | |
733-848, gnl|Mm7|chr2 (52407654-52407540) | |
733-848, gnl|monDom2|scaffold_2 (42837102-42837064) | |
733-848, gnl|monDom2|scaffold_2 (42836593-42837092) | |
733-848, gnl|oryCun1|scaffold_137423 (1655-1686) | |
733-848, gnl|oryCun1|scaffold_137423 (2116-1658) | |
733-848, gnl|panTro1|chr13 (41542161-41542104) | |
733-848, gnl|panTro1|chr13 (41541690-41542158) | |
733-848, gnl|rheMac2|chr10 (67497489-67497433) | |
733-848, gnl|rheMac2|chr12 (15469717-15470187) | |
733-848, gnl|rn3|chr3 (33800449-33800405) | |
733-848, gnl|rn3|chr3 (33800006-33800446) |
Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
61-511, gnl|bosTau2|chr2 (29520893-29521335) | |
61-511, gnl|Hg17|chr2 (152483802-152483360) | |
61-511, gnl|Mm7|chr2 (52408315-52407906) | |
733-848, gnl|bosTau2|chr2 (29521543-29521654) | |
733-848, gnl|canFam2|chr19 (55985728-55985664) | |
733-848, gnl|canFam2|chr19 (55985287-55985725) | |
733-848, gnl|echTel1|scaffold_295116 (2258-2813) | |
733-848, gnl|hg17|chr2 (152482638-152483108) | |
733-848, gnl|Hg17|chr2 (152483127-152483019) | |
733-848, gnl|hg17|chr22 (23413605-23413671) | |
733-848, gnl|loxAfr1|scaffold_1142 (28978-28909) | |
733-848, gnl|loxAfr1|scaffold_1142 (28476-28975) | |
733-848, gnl|mm7|chr2 (52407638-52407580) | |
733-848, gnl|mm7|chr2 (52407184-52407635) | |
733-848, gnl|Mm7|chr2 (52407654-52407540) | |
733-848, gnl|monDom2|scaffold_2 (42837102-42837064) | |
733-848, gnl|monDom2|scaffold_2 (42836593-42837092) | |
733-848, gnl|oryCun1|scaffold_137423 (1655-1686) | |
733-848, gnl|oryCun1|scaffold_137423 (2116-1658) | |
733-848, gnl|panTro1|chr13 (41542161-41542104) | |
733-848, gnl|panTro1|chr13 (41541690-41542158) | |
733-848, gnl|rheMac2|chr10 (67497489-67497433) | |
733-848, gnl|rheMac2|chr12 (15469717-15470187) | |
733-848, gnl|rn3|chr3 (33800449-33800405) | |
733-848, gnl|rn3|chr3 (33800006-33800446) |
Expressed library(ies): 5 entry(ies) | More info |
Expressed library(ies): 5 entry(ies) | Help | Less info |
sto (0.179824) | |
thg (0.126791) | |
jca (0.11396) | |
spc (0.113366) | |
ldo (0.0970026) |
Expressed library(ies): 5 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
sto (0.179824) | |
thg (0.126791) | |
jca (0.11396) | |
spc (0.113366) | |
ldo (0.0970026) |