Non-Coding RNA Search

Ss1.1-Pig4-TMW8041E18.3

Sequence:


               
               ATTAGCTCTGTGGCTTTAATTAATATATAATATTATATATATTATAATTAATATTTATAA
TTATTCTAGCATTTGTAAATGAACATGCACTGTAGGTAAATAATCTGTTTTCTCTCTTTT
AAGCATTTTAATTCAAAAGATCAAATGTATCCAGATGGAAATTTCACTGATGTAAGTGTT
GTGGAAATAGAAGCAAATGACAAAAAACCTTTTCCAGAAGATCTGAAATCATTGGACATA
TTCAAGAAGGAAAAAATTAATACTGAAGGACACAGTAGTGGTATTGGAGGGTCTTCGTGC
ATGTCATCTTCTAGGCCAAGCATTTCTAGCAGTGATGAAAATGAATCTGCACAGAACACT
TCAAGCACTGTCCAGTATTCCACTGTGGTACACAGTGGCTACAGACACCAGGTACCATCG
GTCCAAGTCTTCTCACGGTCCGAGTCCACCCAGCCCTTGTTAGATTCTGAAGAGCGGCCA
GAAGAGCTACAGCTAGTAGATAATGTAGATGGAAGTGATGGCATTTTACCCAGACAACAG
TATTTCAAACAAAACTGTAGTCAACACGAAACCAGTCCAGATATTTCACATTTTGAAAGG
TCAAAGCAAGTTTCATCAGTCAATGAAGATTTTGTTAGACTTAAACAGCAGCAGATTTCA
GATTGTATTTCACAGCCCTATGGATCTGGGCAAATGAAAATGTTTCAGGAAGTTTCTGCA
ACAGATGCTTTTGGTCCAGGCACACAGACTGTAAGACGAGGTGGCTACATGCCTCAGTGA
AAGACTAGTTCCTGTTACAACTTCAGAAGTACCTTCAGCATCCTCCGTGGGGGTCCGGCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTAGCTCTGTGGCTTTAATTAATATATAATATTATATATATTATAATTAATATTTATAA
TTATTCTAGCATTTGTAAATGAACATGCACTGTAGGTAAATAATCTGTTTTCTCTCTTTT
AAGCATTTTAATTCAAAAGATCAAATGTATCCAGATGGAAATTTCACTGATGTAAGTGTT
GTGGAAATAGAAGCAAATGACAAAAAACCTTTTCCAGAAGATCTGAAATCATTGGACATA
TTCAAGAAGGAAAAAATTAATACTGAAGGACACAGTAGTGGTATTGGAGGGTCTTCGTGC
ATGTCATCTTCTAGGCCAAGCATTTCTAGCAGTGATGAAAATGAATCTGCACAGAACACT
TCAAGCACTGTCCAGTATTCCACTGTGGTACACAGTGGCTACAGACACCAGGTACCATCG
GTCCAAGTCTTCTCACGGTCCGAGTCCACCCAGCCCTTGTTAGATTCTGAAGAGCGGCCA
GAAGAGCTACAGCTAGTAGATAATGTAGATGGAAGTGATGGCATTTTACCCAGACAACAG
TATTTCAAACAAAACTGTAGTCAACACGAAACCAGTCCAGATATTTCACATTTTGAAAGG
TCAAAGCAAGTTTCATCAGTCAATGAAGATTTTGTTAGACTTAAACAGCAGCAGATTTCA
GATTGTATTTCACAGCCCTATGGATCTGGGCAAATGAAAATGTTTCAGGAAGTTTCTGCA
ACAGATGCTTTTGGTCCAGGCACACAGACTGTAAGACGAGGTGGCTACATGCCTCAGTGA
AAGACTAGTTCCTGTTACAACTTCAGAAGTACCTTCAGCATCCTCCGTGGGGGTCCGGCG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61839675|ref|XP_600430.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61839675|ref|XP_600430.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               56-742, gnl|bosTau2|chr20 (13341808-13342497)
               

               
               56-742, gnl|Hg17|chr5 (55273426-55272783)
               

               
               56-742, gnl|Mm7|chr13 (109659538-109660227)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               56-742, gnl|bosTau2|chr20 (13341808-13342497)
               

               
               56-742, gnl|Hg17|chr5 (55273426-55272783)
               

               
               56-742, gnl|Mm7|chr13 (109659538-109660227)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               hea (0.204499)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hea (0.204499)

	56-742, gnl\|bosTau2\|chr20 (13341808-13342497)
	56-742, gnl\|Hg17\|chr5 (55273426-55272783)
	56-742, gnl\|Mm7\|chr13 (109659538-109660227)