Ss1.1-Pig4-TMW8041H03.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAGACCCAAAGTACAACTGGTCGTCGAAGAAGAGCAGCTAATGAAGATCCTGATGAAAAA AGGAGGAAATTTCTGGAGCGAAATAGAGCAGCAGCTTCAAGATGCCGACAGAAAAGGAAA GTCTGGGTTCAGTCTTTAGAGAAGAAAGCAGAAGACTTGAGTTCATTAAATGGTCAGCTG CAGAGTGAAGTCACCCTGCTGAGAAATGAAGTGGCACAGCTGAAACAGCTTCTTCTGGCT CATAAAGATTGCCCTGTAACCGCCATGCAGAAGAAATCTGGCTATCATACTACTGACAAA GATGATAGTTCAGAAGACCTGTCAGTGCCGAGTAGTCCACATACTGAAGCTATACAGCAT AGCTCTGTCAGCACATCCAACGGAGTCAGCTCCACTTCCAAGGCAGAAGCTGTAGCCACT TCAGTCCTCACCCAGATGGCGGACCAGAGTACAGAGCCTGCGCTTTCACAGATTGTTATG GCTCCTTCCTCCCAGTCACAGCCCTCAGGAAGTTGATTAAAAACCTGCAGTGCAGCGGTT TTAGATACTCATTAGTGACTTCAAAGGGAAATCAAGGAAAGACCGGTTTCCATTGATGCA AAATCTGTGGTTGTAAATTTTTTTTTTTTACTTGAAATTAAATTTGGCTCTAAAGTTGGT GTAACAGCAGTTGATGATCAGACTGAACAGTTTTTAGTCTCTGGAAAAGGACTCATCAAT AAACTCAGTTAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAGACCCAAAGTACAACTGGTCGTCGAAGAAGAGCAGCTAATGAAGATCCTGATGAAAAA AGGAGGAAATTTCTGGAGCGAAATAGAGCAGCAGCTTCAAGATGCCGACAGAAAAGGAAA GTCTGGGTTCAGTCTTTAGAGAAGAAAGCAGAAGACTTGAGTTCATTAAATGGTCAGCTG CAGAGTGAAGTCACCCTGCTGAGAAATGAAGTGGCACAGCTGAAACAGCTTCTTCTGGCT CATAAAGATTGCCCTGTAACCGCCATGCAGAAGAAATCTGGCTATCATACTACTGACAAA GATGATAGTTCAGAAGACCTGTCAGTGCCGAGTAGTCCACATACTGAAGCTATACAGCAT AGCTCTGTCAGCACATCCAACGGAGTCAGCTCCACTTCCAAGGCAGAAGCTGTAGCCACT TCAGTCCTCACCCAGATGGCGGACCAGAGTACAGAGCCTGCGCTTTCACAGATTGTTATG GCTCCTTCCTCCCAGTCACAGCCCTCAGGAAGTTGATTAAAAACCTGCAGTGCAGCGGTT TTAGATACTCATTAGTGACTTCAAAGGGAAATCAAGGAAAGACCGGTTTCCATTGATGCA AAATCTGTGGTTGTAAATTTTTTTTTTTTACTTGAAATTAAATTTGGCTCTAAAGTTGGT GTAACAGCAGTTGATGATCAGACTGAACAGTTTTTAGTCTCTGGAAAAGGACTCATCAAT AAACTCAGTTAC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 1-183, gnl|bosTau2|chr2 (15088228-15088046) | |
| 1-183, gnl|canFam2|chr36 (22073951-22074162) | |
| 1-183, gnl|danRer3|chr9 (4863943-4863732) | |
| 1-183, gnl|dasNov1|scaffold_39525 (37017-36806) | |
| 1-183, gnl|echTel1|scaffold_321623 (54729-54517) | |
| 1-183, gnl|fr1|chrUn (177916443-177916654) | |
| 1-183, gnl|galGal2|chr7 (17494132-17493921) | |
| 1-183, gnl|hg17|chr2 (175783294-175783505) | |
| 1-183, gnl|Hg17|chr2 (175783478-175783296) | |
| 1-183, gnl|loxAfr1|scaffold_59349 (1611-1822) | |
| 1-183, gnl|mm7|chr2 (73672186-73672397) | |
| 1-183, gnl|Mm7|chr2 (73672370-73672188) | |
| 1-183, gnl|monDom2|scaffold_2 (74808104-74808315) | |
| 1-183, gnl|oryCun1|scaffold_145379 (10254-10465) | |
| 1-183, gnl|panTro1|chr13 (65418415-65418626) | |
| 1-183, gnl|rheMac2|chr12 (38751905-38752116) | |
| 1-183, gnl|rn3|chr3 (56329016-56329227) | |
| 1-183, gnl|tetNig1|chr2 (11212090-11211880) | |
| 1-183, gnl|xenTro1|scaffold_353 (53401-53612) | |
| 290-716, gnl|bosTau2|chr2 (15071712-15071284) | |
| 290-716, gnl|Hg17|chr2 (175765070-175764644) | |
| 290-716, gnl|Mm7|chr2 (73662864-73662440) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-183, gnl|bosTau2|chr2 (15088228-15088046) | |
| 1-183, gnl|canFam2|chr36 (22073951-22074162) | |
| 1-183, gnl|danRer3|chr9 (4863943-4863732) | |
| 1-183, gnl|dasNov1|scaffold_39525 (37017-36806) | |
| 1-183, gnl|echTel1|scaffold_321623 (54729-54517) | |
| 1-183, gnl|fr1|chrUn (177916443-177916654) | |
| 1-183, gnl|galGal2|chr7 (17494132-17493921) | |
| 1-183, gnl|hg17|chr2 (175783294-175783505) | |
| 1-183, gnl|Hg17|chr2 (175783478-175783296) | |
| 1-183, gnl|loxAfr1|scaffold_59349 (1611-1822) | |
| 1-183, gnl|mm7|chr2 (73672186-73672397) | |
| 1-183, gnl|Mm7|chr2 (73672370-73672188) | |
| 1-183, gnl|monDom2|scaffold_2 (74808104-74808315) | |
| 1-183, gnl|oryCun1|scaffold_145379 (10254-10465) | |
| 1-183, gnl|panTro1|chr13 (65418415-65418626) | |
| 1-183, gnl|rheMac2|chr12 (38751905-38752116) | |
| 1-183, gnl|rn3|chr3 (56329016-56329227) | |
| 1-183, gnl|tetNig1|chr2 (11212090-11211880) | |
| 1-183, gnl|xenTro1|scaffold_353 (53401-53612) | |
| 290-716, gnl|bosTau2|chr2 (15071712-15071284) | |
| 290-716, gnl|Hg17|chr2 (175765070-175764644) | |
| 290-716, gnl|Mm7|chr2 (73662864-73662440) |
| Expressed library(ies): 5 entry(ies) | More info |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
| tbr (0.154178) | |
| fat (0.147427) | |
| liv (0.146284) | |
| nca (0.136874) | |
| nmm (0.132802) |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| tbr (0.154178) | |
| fat (0.147427) | |
| liv (0.146284) | |
| nca (0.136874) | |
| nmm (0.132802) |