Non-Coding RNA Search

Ss1.1-Pig4-TMW8041I01.3

Sequence:


               
               CTTCAATGCAGATTTTTGCTTTCCTCAAAGTCTGCATAGCAAATAATCTTTACCATGGTA
TAAAAAAGTGAAAAAAGTTTCAAAACCAGGTTTGATGGAAAGATGAATTCACTGAGTTTG
CTTTGAACGAATATGGGGGGAGGGAGGAAATAAAGGCATAGATGAAAGACCATTGGCCAT
GGCCATGAACAAGGAGAGTTGACTACATGATTATTTCTACTGTTATATGTGTTTGAAATC
TTTCTCAACTAAAAGGAAAGGAACAAAAAACTATCATTAAAATAAACTAATGCATTACTA
TTGGGTCACTATCACCTGCAGCATGTGTGTCCTAATTCATAACACCGGCTCTGAAGAGAC
CATAAGCTTTGTGCATCATTAGCCCATCTTGAGAACTCAGATATTAAATATATACAAAAT
CAGTCTTTTCATAGTTAAAAGGAGACCATTTTTAAATGACACCGAATAATTCCTATTTTT
TAGTTTAATTTTTATTTTAAATTGGAGCATAGTTGATTTACAATGTTGTGTTAGTTTCAG
GTGTCCAGCAAAGTGGTTCATTTATACATATACATATATCCATTCTTTATGAGATTCTTT
TCCCATATAGTTATTACAGAATACTGAATAGAGTTCCCTATGCTAACCAGTAGGTCCTTG
TCGGTTATCTATTTTATATACAGTAGTGTGTATATGTTAATTCCAAACTCCTTATTCCTC
CCCCCACCAGGTGTTTCCCCTTTGGTAACAATAAATTTGTTTTCAAAGTATAACTGGTCC
TCGTACCAGGACCAAAGAGAAACTTCCCTGAAGGAGCCCCACAAGGAGGCTGCTGTGTAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTCAATGCAGATTTTTGCTTTCCTCAAAGTCTGCATAGCAAATAATCTTTACCATGGTA
TAAAAAAGTGAAAAAAGTTTCAAAACCAGGTTTGATGGAAAGATGAATTCACTGAGTTTG
CTTTGAACGAATATGGGGGGAGGGAGGAAATAAAGGCATAGATGAAAGACCATTGGCCAT
GGCCATGAACAAGGAGAGTTGACTACATGATTATTTCTACTGTTATATGTGTTTGAAATC
TTTCTCAACTAAAAGGAAAGGAACAAAAAACTATCATTAAAATAAACTAATGCATTACTA
TTGGGTCACTATCACCTGCAGCATGTGTGTCCTAATTCATAACACCGGCTCTGAAGAGAC
CATAAGCTTTGTGCATCATTAGCCCATCTTGAGAACTCAGATATTAAATATATACAAAAT
CAGTCTTTTCATAGTTAAAAGGAGACCATTTTTAAATGACACCGAATAATTCCTATTTTT
TAGTTTAATTTTTATTTTAAATTGGAGCATAGTTGATTTACAATGTTGTGTTAGTTTCAG
GTGTCCAGCAAAGTGGTTCATTTATACATATACATATATCCATTCTTTATGAGATTCTTT
TCCCATATAGTTATTACAGAATACTGAATAGAGTTCCCTATGCTAACCAGTAGGTCCTTG
TCGGTTATCTATTTTATATACAGTAGTGTGTATATGTTAATTCCAAACTCCTTATTCCTC
CCCCCACCAGGTGTTTCCCCTTTGGTAACAATAAATTTGTTTTCAAAGTATAACTGGTCC
TCGTACCAGGACCAAAGAGAAACTTCCCTGAAGGAGCCCCACAAGGAGGCTGCTGTGTAA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               448-767, gnl|bosTau2|chr1 (78092297-78091975)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               448-767, gnl|bosTau2|chr1 (78092297-78091975)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

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               fat (0.147427)
               

               
               ste (0.135208)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fat (0.147427)
               

               
               ste (0.135208)