Non-Coding RNA Search

Ss1.1-Pig4-TMW8041K17.3

Sequence:


               
               TTAAGAGATTCTTCATCTGAGCATGAAGATGCCATTTTGTCTTAAGGGTTTAGACCTCAG
TACCTTTGATGATAATTTACAGTTGAAGGCTCTTAACTGCTCTGTGAGAATCTGGTCGTG
GTCTAAATTGGCGTTGCTTTCAGGACGGGTCTTCCTGAGACGCTGCTTCCTTGGGCAGGG
GGTGGTTGATCTGCGCCAAGATCCACAGCTCCGTGATTCTCTTTCAGAGCATCCCTTAGG
TTAAACCAATAGGAAGAGCCCTGGACTAAAACACTGAAGCAGTGTTTCCTCGGAAGCCCA
TGAGTTGGCAAAAGCCAGGATGTGTTTCCTTTCCTTTCCTTCATTCCTTTTATTTGTTTC
CCCAGGTGACTCTCAAACATCTACTGTAGAGTACATTTTGTGAAAAGCTGGGCTAAGCAT
ATTCTGAAATCTGTAGGTAGTGACGTGGTGCTCACTGACGCTGCTTCACGCGGTGGCTGA
CCCAGCAGGTGCCAAAGACGGGTGATGTAGAGGCAGCCACTGCACGGGGGCATCGGCCAC
CTTCCTGAGTAGAGCCTGAGCCCTTGGGGGCATCTTTGCGATCCTTCATAACAGGTGTAT
GTGGATAGGCTGAGGTCGGGTGCAGGTCTCCACAGATGCAATCTGCATCTGCAGCTTCCG
TGTCGCTATGAAACTGCAGTTATGCCGCTGGAGGGTCTCGTTCCGCCTGGAATCCAGCCA
GTCGTGGTCATGCACGCAGCTCAAGATGTCATGTTGGCAGATCTCATTCTCGATCTGAAA
GCACCGCCGACAGGGCCACCAACATCTCCAAGAGTGGATGGATACAATGTCAGACAATCA
CCTGGGCCCGGAGCAATGTTTACATGATGTATAAGCAGAAAGTATTTGCAATTACAGGTG
TTCCTTTTTTAAAATGGAAACTGAGTGAAAACATGTTATGTACATTTTTGTACATGACTG
TATTTTGTAGAAACTTAAATAAAATATTTTTCATCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTAAGAGATTCTTCATCTGAGCATGAAGATGCCATTTTGTCTTAAGGGTTTAGACCTCAG
TACCTTTGATGATAATTTACAGTTGAAGGCTCTTAACTGCTCTGTGAGAATCTGGTCGTG
GTCTAAATTGGCGTTGCTTTCAGGACGGGTCTTCCTGAGACGCTGCTTCCTTGGGCAGGG
GGTGGTTGATCTGCGCCAAGATCCACAGCTCCGTGATTCTCTTTCAGAGCATCCCTTAGG
TTAAACCAATAGGAAGAGCCCTGGACTAAAACACTGAAGCAGTGTTTCCTCGGAAGCCCA
TGAGTTGGCAAAAGCCAGGATGTGTTTCCTTTCCTTTCCTTCATTCCTTTTATTTGTTTC
CCCAGGTGACTCTCAAACATCTACTGTAGAGTACATTTTGTGAAAAGCTGGGCTAAGCAT
ATTCTGAAATCTGTAGGTAGTGACGTGGTGCTCACTGACGCTGCTTCACGCGGTGGCTGA
CCCAGCAGGTGCCAAAGACGGGTGATGTAGAGGCAGCCACTGCACGGGGGCATCGGCCAC
CTTCCTGAGTAGAGCCTGAGCCCTTGGGGGCATCTTTGCGATCCTTCATAACAGGTGTAT
GTGGATAGGCTGAGGTCGGGTGCAGGTCTCCACAGATGCAATCTGCATCTGCAGCTTCCG
TGTCGCTATGAAACTGCAGTTATGCCGCTGGAGGGTCTCGTTCCGCCTGGAATCCAGCCA
GTCGTGGTCATGCACGCAGCTCAAGATGTCATGTTGGCAGATCTCATTCTCGATCTGAAA
GCACCGCCGACAGGGCCACCAACATCTCCAAGAGTGGATGGATACAATGTCAGACAATCA
CCTGGGCCCGGAGCAATGTTTACATGATGTATAAGCAGAAAGTATTTGCAATTACAGGTG
TTCCTTTTTTAAAATGGAAACTGAGTGAAAACATGTTATGTACATTTTTGTACATGACTG
TATTTTGTAGAAACTTAAATAAAATATTTTTCATCA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               42-994, gnl|bosTau2|chr6 (19322188-19323191)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               42-994, gnl|bosTau2|chr6 (19322188-19323191)

Expressed library(ies): 4 entry(ies)

More info

Expressed library(ies): 4 entry(ies)

Help | Less info


               
               elu (0.385356)
               

               
               aor (0.195274)
               

               
               tra (0.123092)
               

               
               ldo (0.0970026)

Expressed library(ies): 4 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               elu (0.385356)
               

               
               aor (0.195274)
               

               
               tra (0.123092)
               

               
               ldo (0.0970026)