Non-Coding RNA Search

Ss1.1-Pig4-TMW8041N08.3

Sequence:


               
               CACAGACACTATGCTGGATTCTTAACGTGCTGAGCCACAACAGGAATTCCTAAGTGTTAA
TTTTTAAAGCTGTAACAACATGCCAAATTCTATTAAAAGCTAGAGAAATCCTTAGTTAGA
AATTCTTATCTGACTCAAAGATAAAATTTGCTTCAATAGATCGCGACTGGAGTTTTTTTT
TTTTTTTTTATGGCAGCGTATGGAAGTTCCTGGGCCAGAGATTGGATCTGAGCTGCAGCA
ACACCAGATCCTTTAACCCACTGTGCCAGGCCAGAGATCCAACCTGCACCTCCCCAGCAA
CCCGAGCCACTGAAATTGGATTCTTAACCCACTGTGCCACAGTGGGAACTCCAGAATATG
CTTCCACATTTTAAGAATGGCATACTTAGGACAGTGCTTGCAAAAGCGATGGGAGACCAG
ATAAATTATTAGGGAGGCTCTTAGAGGAATTAGTGGATTAGGAGGTTAGGAGCTGGATAA
GGTCCATTACTGTAGAGAAAGAATGAGAAATACAATAGAGAAGGAGAATTCAATCAAATT
CACGTGATGAAAGACAGTATAAGAGGCAAAGAAAAAGGAAAGAAGTTGAATATAACTCCA
AAGCCATAGGCAAAAAAAAATGTTTTCTGGTTTTAATGTAGCTAATTTTAAGGGGCTATC
ATGAAATTCATTTTAAAAAATGTCCTAAAGAAAAGTCAAAAGAGATTATTTGTACACATA
GAACTGTTTTCCCAAAAGAAGAATAACAGGTTCTAAGAGAAGGCTGAATCTTAATTTTAA
TACCTTAGATACTAGAAAATCTCCATAAAAGATGAAGATATTCAGAGAAATCCATAAAAT
CCCAGTAGTGTTTAAGAGCATAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CACAGACACTATGCTGGATTCTTAACGTGCTGAGCCACAACAGGAATTCCTAAGTGTTAA
TTTTTAAAGCTGTAACAACATGCCAAATTCTATTAAAAGCTAGAGAAATCCTTAGTTAGA
AATTCTTATCTGACTCAAAGATAAAATTTGCTTCAATAGATCGCGACTGGAGTTTTTTTT
TTTTTTTTTATGGCAGCGTATGGAAGTTCCTGGGCCAGAGATTGGATCTGAGCTGCAGCA
ACACCAGATCCTTTAACCCACTGTGCCAGGCCAGAGATCCAACCTGCACCTCCCCAGCAA
CCCGAGCCACTGAAATTGGATTCTTAACCCACTGTGCCACAGTGGGAACTCCAGAATATG
CTTCCACATTTTAAGAATGGCATACTTAGGACAGTGCTTGCAAAAGCGATGGGAGACCAG
ATAAATTATTAGGGAGGCTCTTAGAGGAATTAGTGGATTAGGAGGTTAGGAGCTGGATAA
GGTCCATTACTGTAGAGAAAGAATGAGAAATACAATAGAGAAGGAGAATTCAATCAAATT
CACGTGATGAAAGACAGTATAAGAGGCAAAGAAAAAGGAAAGAAGTTGAATATAACTCCA
AAGCCATAGGCAAAAAAAAATGTTTTCTGGTTTTAATGTAGCTAATTTTAAGGGGCTATC
ATGAAATTCATTTTAAAAAATGTCCTAAAGAAAAGTCAAAAGAGATTATTTGTACACATA
GAACTGTTTTCCCAAAAGAAGAATAACAGGTTCTAAGAGAAGGCTGAATCTTAATTTTAA
TACCTTAGATACTAGAAAATCTCCATAAAAGATGAAGATATTCAGAGAAATCCATAAAAT
CCCAGTAGTGTTTAAGAGCATAAG

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               353-864, gnl|bosTau2|chr16 (42097272-42096756)
               

               
               353-864, gnl|Hg17|chr1 (177056587-177056075)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               353-864, gnl|bosTau2|chr16 (42097272-42096756)
               

               
               353-864, gnl|Hg17|chr1 (177056587-177056075)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (0.133672)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)

	353-864, gnl\|bosTau2\|chr16 (42097272-42096756)
	353-864, gnl\|Hg17\|chr1 (177056587-177056075)