Non-Coding RNA Search

Ss1.1-Pig4-TMW8041N22.3

Sequence:


               
               AAAGTTGCTTGCTGTTGGGAGATATTTTAAGATGAGTTGGTATACATTTTATTTGTGTAG
CCTGTATTCTGTTTAATTTGAAAGGAACTTTACTTTTCCTGGCATTTTAGTTTCCCTTAA
AAATAAAGTATTGGAAGAAACTTAAGAGGTCTGTTAATATCAGTATCTAAATGTGACATT
TAAAATGTCATGGAAGCTATGCTTTGAATAAAAACTTGGGAAAAAGAACCATATAATTGC
CCCTTTTTTGTTGTATGGATGGCCTTGGATTACACCGGGCTTAATCACATTTTTAGAAAA
TATTTGCCCATCTCAGACTGATAAAGTGGAGTCCTTTTAAAAATAAAAATTGGGAAATGG
CTTTTTGATTATATTATCAGTGTAGTTAAGATTGGCTAAGGCAATAAAGAAAAATTTGAA
ATGCTCAGAAATTTATTGTAAATTGCTTCTACAGTCATTGATAAAGCATGCTACTACTAA
TCAATTAGTTTATGTATTAAGACCTATCAGCATGTCTTTTTTAAGAACCTGGTTGACTTG
ATTTTAAACTAATGATGTTCTCTGTACCATTTGACTTTTTCAAGATACTCTCCCCAAGCC
AATTCGGTTGGAAGCAAGTGTTTCTAGTTCTAGAAGCCTACTTGTAGAGTCTTCATATTG
AAATTCATAGTGGGCTTTAATGGGGTTTTGATTTGCACTAAACTTTATTTCCTGAAAGAT
TACTCATGTTCAAATTATAATGTAGTGCTTTTGTCTTATAATTAAACTCTTACAGCACTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAGTTGCTTGCTGTTGGGAGATATTTTAAGATGAGTTGGTATACATTTTATTTGTGTAG
CCTGTATTCTGTTTAATTTGAAAGGAACTTTACTTTTCCTGGCATTTTAGTTTCCCTTAA
AAATAAAGTATTGGAAGAAACTTAAGAGGTCTGTTAATATCAGTATCTAAATGTGACATT
TAAAATGTCATGGAAGCTATGCTTTGAATAAAAACTTGGGAAAAAGAACCATATAATTGC
CCCTTTTTTGTTGTATGGATGGCCTTGGATTACACCGGGCTTAATCACATTTTTAGAAAA
TATTTGCCCATCTCAGACTGATAAAGTGGAGTCCTTTTAAAAATAAAAATTGGGAAATGG
CTTTTTGATTATATTATCAGTGTAGTTAAGATTGGCTAAGGCAATAAAGAAAAATTTGAA
ATGCTCAGAAATTTATTGTAAATTGCTTCTACAGTCATTGATAAAGCATGCTACTACTAA
TCAATTAGTTTATGTATTAAGACCTATCAGCATGTCTTTTTTAAGAACCTGGTTGACTTG
ATTTTAAACTAATGATGTTCTCTGTACCATTTGACTTTTTCAAGATACTCTCCCCAAGCC
AATTCGGTTGGAAGCAAGTGTTTCTAGTTCTAGAAGCCTACTTGTAGAGTCTTCATATTG
AAATTCATAGTGGGCTTTAATGGGGTTTTGATTTGCACTAAACTTTATTTCCTGAAAGAT
TACTCATGTTCAAATTATAATGTAGTGCTTTTGTCTTATAATTAAACTCTTACAGCACTC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               9-780, gnl|bosTau2|chr6 (54117778-54118519)
               

               
               9-780, gnl|Hg17|chr4 (83623984-83623209)
               

               
               9-780, gnl|Mm7|chr5 (99171449-99170721)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               9-780, gnl|bosTau2|chr6 (54117778-54118519)
               

               
               9-780, gnl|Hg17|chr4 (83623984-83623209)
               

               
               9-780, gnl|Mm7|chr5 (99171449-99170721)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ece (0.229305)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ece (0.229305)

	9-780, gnl\|bosTau2\|chr6 (54117778-54118519)
	9-780, gnl\|Hg17\|chr4 (83623984-83623209)
	9-780, gnl\|Mm7\|chr5 (99171449-99170721)