Ss1.1-Pig4-TMW8042D20.5
|
GCCCCGGGCGTGCGGGGCGGCTCCCGGCCTCCAGACGGCAGGGGGCGGCCTCGCCCACGG
CGGAGGTGGCTCGGGTTCCGGGTTCCGCGCCTTTTGGGAGACTCGGCGACCTCGGGCGGC
GGGCCGCGTCGGCCGGGCATGGCTGCTTGGAGCCCGGCCGCGGCAGCGCCTCTGCTCCGC
GGGAGCCGCGGGCTCCCTCTTCTCCACTCTGCCCAGCGGATGTTTGCCTCGCAGACTGAG
GGGGAGCGCAAAGTGACCCAAATTCTCAAAGAAAAATTTCCTCGAGCTACAGCTATCAAA
GTCACTGACATTTCAGGAGGCTGTGGGGCAATGTATGAAATTCAAATCGAATCAGAAGAA
TTTAAGGAGAAGAGAACTGTCCAGCAGCACCAGATGGTAAATCAGGCATTAAAAGAAGAA
ATCAAAGGCATGCACGGATTGCGGATATTTACCTCTGTCCCCAAACACTGACTACGCCCG
GCGCTGTAGCTGCTGCTTTTGCACCTCGGATGAATTTGACGGACACCATTCTTTCCTAAG
GCATCAGACCAGGATGTTATCTATTTTGTTCATAGACATTTCCATATTATAATTATAGAA
GACTATGTTATCTATTTAGATGTTGAAGGCAACAGATAACTAAATTTTTTTTTCATTGCA
AAAATATTTATTGAATCCTGCTCTGTGCGAGGCGACATTCTCAGTATGGGGATAATGTAA
TTAACAGGAGCAGACCAAGAAAGAACTATGCGAAATTTCCGAAGAGTCATTAGTAATGCT |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GCCCCGGGCGTGCGGGGCGGCTCCCGGCCTCCAGACGGCAGGGGGCGGCCTCGCCCACGG
CGGAGGTGGCTCGGGTTCCGGGTTCCGCGCCTTTTGGGAGACTCGGCGACCTCGGGCGGC
GGGCCGCGTCGGCCGGGCATGGCTGCTTGGAGCCCGGCCGCGGCAGCGCCTCTGCTCCGC
GGGAGCCGCGGGCTCCCTCTTCTCCACTCTGCCCAGCGGATGTTTGCCTCGCAGACTGAG
GGGGAGCGCAAAGTGACCCAAATTCTCAAAGAAAAATTTCCTCGAGCTACAGCTATCAAA
GTCACTGACATTTCAGGAGGCTGTGGGGCAATGTATGAAATTCAAATCGAATCAGAAGAA
TTTAAGGAGAAGAGAACTGTCCAGCAGCACCAGATGGTAAATCAGGCATTAAAAGAAGAA
ATCAAAGGCATGCACGGATTGCGGATATTTACCTCTGTCCCCAAACACTGACTACGCCCG
GCGCTGTAGCTGCTGCTTTTGCACCTCGGATGAATTTGACGGACACCATTCTTTCCTAAG
GCATCAGACCAGGATGTTATCTATTTTGTTCATAGACATTTCCATATTATAATTATAGAA
GACTATGTTATCTATTTAGATGTTGAAGGCAACAGATAACTAAATTTTTTTTTCATTGCA
AAAATATTTATTGAATCCTGCTCTGTGCGAGGCGACATTCTCAGTATGGGGATAATGTAA
TTAACAGGAGCAGACCAAGAAAGAACTATGCGAAATTTCCGAAGAGTCATTAGTAATGCT |
|
3-192, gnl|bosTau2|chr11 (9678140-9678329) |
|
3-192, gnl|Hg17|chr2 (74286790-74286603) |
|
3-192, gnl|Mm7|chr6 (83374755-83374925) |
| |
|
404-780, gnl|bosTau2|chr11 (9685799-9686179) |
|
404-780, gnl|canFam2|chr17 (52021286-52021548) |
|
404-780, gnl|dasNov1|scaffold_98016 (1967-2227) |
|
404-780, gnl|echTel1|scaffold_278522 (37685-37445) |
|
404-780, gnl|hg17|chr11 (102256720-102256979) |
|
404-780, gnl|loxAfr1|scaffold_5196 (49859-49606) |
|
404-780, gnl|mm7|chr4 (148086184-148086429) |
|
404-780, gnl|oryCun1|scaffold_212193 (5546-5345) |
|
404-780, gnl|panTro1|chr9 (104239631-104239890) |
|
404-780, gnl|rheMac2|chr14 (101500248-101500495) |
|
404-780, gnl|rn3|chr4 (117815659-117815920) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
3-192, gnl|bosTau2|chr11 (9678140-9678329) |
|
3-192, gnl|Hg17|chr2 (74286790-74286603) |
|
3-192, gnl|Mm7|chr6 (83374755-83374925) |
| |
|
404-780, gnl|bosTau2|chr11 (9685799-9686179) |
|
404-780, gnl|canFam2|chr17 (52021286-52021548) |
|
404-780, gnl|dasNov1|scaffold_98016 (1967-2227) |
|
404-780, gnl|echTel1|scaffold_278522 (37685-37445) |
|
404-780, gnl|hg17|chr11 (102256720-102256979) |
|
404-780, gnl|loxAfr1|scaffold_5196 (49859-49606) |
|
404-780, gnl|mm7|chr4 (148086184-148086429) |
|
404-780, gnl|oryCun1|scaffold_212193 (5546-5345) |
|
404-780, gnl|panTro1|chr9 (104239631-104239890) |
|
404-780, gnl|rheMac2|chr14 (101500248-101500495) |
|
404-780, gnl|rn3|chr4 (117815659-117815920) |
|
sme (0.91631) |
|
sto (0.899119) |
|
bfe (0.749288) |
|
cte (0.58548) |
|
che (0.545256) |
|
ssp (0.542079) |
|
aor (0.390549) |
|
elu (0.385356) |
|
rec (0.346141) |
|
fce (0.271592) |
|
kid (0.259471) |
|
bla (0.248694) |
|
cbe (0.239234) |
|
pgl (0.236967) |
|
ece (0.229305) |
|
nms (0.213858) |
|
hea (0.204499) |
|
mgm (0.180343) |
|
gul (0.177588) |
|
fty (0.17584) |
|
ill (0.175593) |
|
sin (0.174948) |
|
cut (0.169924) |
|
cje (0.165235) |
|
nco (0.161734) |
|
csp (0.161186) |
|
cli (0.152812) |
|
eli (0.151814) |
|
lun (0.150489) |
|
isp (0.150376) |
|
lnt (0.142308) |
|
csk (0.140746) |
|
cst (0.140036) |
|
hlv (0.139256) |
|
lyg (0.133103) |
|
cov (0.132153) |
|
ova (0.129132) |
|
sug (0.127291) |
|
ese (0.126502) |
|
ebs (0.118301) |
|
spc (0.113366) |
|
ldo (0.0970026) |
|
sme (0.91631) |
|
sto (0.899119) |
|
bfe (0.749288) |
|
cte (0.58548) |
|
che (0.545256) |
|
ssp (0.542079) |
|
aor (0.390549) |
|
elu (0.385356) |
|
rec (0.346141) |
|
fce (0.271592) |
|
kid (0.259471) |
|
bla (0.248694) |
|
cbe (0.239234) |
|
pgl (0.236967) |
|
ece (0.229305) |
|
nms (0.213858) |
|
hea (0.204499) |
|
mgm (0.180343) |
|
gul (0.177588) |
|
fty (0.17584) |
|
ill (0.175593) |
|
sin (0.174948) |
|
cut (0.169924) |
|
cje (0.165235) |
|
nco (0.161734) |
|
csp (0.161186) |
|
cli (0.152812) |
|
eli (0.151814) |
|
lun (0.150489) |
|
isp (0.150376) |
|
lnt (0.142308) |
|
csk (0.140746) |
|
cst (0.140036) |
|
hlv (0.139256) |
|
lyg (0.133103) |
|
cov (0.132153) |
|
ova (0.129132) |
|
sug (0.127291) |
|
ese (0.126502) |
|
ebs (0.118301) |
|
spc (0.113366) |
|
ldo (0.0970026) |
