Non-Coding RNA Search

Ss1.1-Pig4-TMW8042E08.3

Sequence:


               
               TTTTTTTTTTTT------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------GGTTACCAGTCAGATTTGTTTCCGCTGTGCCGTAAC
AGCAACTCCTTAATATTTTTAAGAATAGAAGAGAATGAAAAGACTCTCCCAGTGGATTGT
ATGGGTGAAAGAACAGATATTCAAAACACTGAAGCCAGCTAGATAGCCCAGAAATAGACT
GATAAAAATACAGTCAATTAAATTTCGACAAAAGTACAAGGGGTAGCATAGAGAAAGGAT
AGTCTTTTATTAAACAAATAGTTCAGGAACAAACAGGTGGCCATATGGAAAAATGAACCT
TGAAACTCTTCACACCTTATAAAAAAGTTAACTCAAAACGGATCACAGACCTAAATGTAA
AACATAAAATTATAACACCTGACGGAGAGCAGTTGGAATGTTCATCCATTGTTGGTGGAA
AGGCAAAATGGTACAGCCACTCTAAGAAACAGTTTGGCAGTTTCTTACAAAGTTAAATAT
ACACTTACCATTCTATCCACTCAGGCCACTCCTAAATATTTACTCAAGTGTATTGAAAGT
TCATACAAAAACCTATATGTAAGTAAGCATTTCTACTAACTTTATTCATAATCCTCCCAA
ACTGGAAACAACTAATGAACTTCAAGGTAAATGAATAAGCCATATCTATACAATAGAATA
CCAGGTATAAAACCAACTACTGATCCGTGCAACACTATCAATGAATCTTAAATGCATTCT
GCTAAATAAAAGAAGCCAGATCCAAATGGTTACATACTGTATTTACATGAGATTAAGGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTTTT------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------GGTTACCAGTCAGATTTGTTTCCGCTGTGCCGTAAC
AGCAACTCCTTAATATTTTTAAGAATAGAAGAGAATGAAAAGACTCTCCCAGTGGATTGT
ATGGGTGAAAGAACAGATATTCAAAACACTGAAGCCAGCTAGATAGCCCAGAAATAGACT
GATAAAAATACAGTCAATTAAATTTCGACAAAAGTACAAGGGGTAGCATAGAGAAAGGAT
AGTCTTTTATTAAACAAATAGTTCAGGAACAAACAGGTGGCCATATGGAAAAATGAACCT
TGAAACTCTTCACACCTTATAAAAAAGTTAACTCAAAACGGATCACAGACCTAAATGTAA
AACATAAAATTATAACACCTGACGGAGAGCAGTTGGAATGTTCATCCATTGTTGGTGGAA
AGGCAAAATGGTACAGCCACTCTAAGAAACAGTTTGGCAGTTTCTTACAAAGTTAAATAT
ACACTTACCATTCTATCCACTCAGGCCACTCCTAAATATTTACTCAAGTGTATTGAAAGT
TCATACAAAAACCTATATGTAAGTAAGCATTTCTACTAACTTTATTCATAATCCTCCCAA
ACTGGAAACAACTAATGAACTTCAAGGTAAATGAATAAGCCATATCTATACAATAGAATA
CCAGGTATAAAACCAACTACTGATCCGTGCAACACTATCAATGAATCTTAAATGCATTCT
GCTAAATAAAAGAAGCCAGATCCAAATGGTTACATACTGTATTTACATGAGATTAAGGAA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               116-742, gnl|bosTau2|chr2 (62289266-62289870)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               116-742, gnl|bosTau2|chr2 (62289266-62289870)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               cut (0.169924)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cut (0.169924)