Ss1.1-Pig4-TMW8042F22.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGGGCTCTGCTGCTCTTGGGGATCCTGCTGGTGAGCCTGGAGTCAGCTCTTTTGATTCCA CCTTGGAAAGACCCCAGGAAGCATAAGGTCATGGCGAGTGAGCACACAGTGGTTCTCACC GTCACGGGGGAGCCCTGTCACTTCCCCTTCCAGTACCACCGGCAGCTGTATTACAAGTGC ATCCAAAGAGGCCAGCGTGGCCCCCGACCCTGGTGTGCTACAACCCCCAACTTCGAGAAG GACCAGCGATGGGCATACTGCCTGGAGCCCATGAAAGTGAAAGACCACTGCAACAAAGGC AACCCCTGCCAGAAAGGAGGGACCTGTGTGAACATGCCAAATGGCCCACACTGCATCTGT CCAGATCACTTCACTGGGAAGCACTGTCAGAAAGAGAAGTGCTTCGAGCCCCAGTTCCTC CAGTTCTTTCAAGAGAATGAAATATGGCATAGGTTTGAGCCTGCTGGTGTGTCCAAGTGC CAGTGCAAAGGTCCTAAGGCCCAATGCAAGCCAGTGGCCAGCCAGGTCTGCAGCACCAAC CCGTGTCTCAATGGGGGCAGCTGCCTGCAGACTGAGGGCCACCGCCTGTGTCGTTGCCCC ACTGGCTATGCAGGACGCCTGTGTGACGTGGACCTCAAGGAGAGGTGCTACAGTGACCGG GGGCTCAGCTACCGCGGCATGGCCCAGACTACGCTCTCGGGAGCACCCTGTCAGCCGTGG GCCTCGGAGGCCACCTACTGGAACATGACCGCAGAGCAAGCTCTGAACTGGGGACTGGGA GACCATGCCTTCTGCCGGAACCCG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGGGCTCTGCTGCTCTTGGGGATCCTGCTGGTGAGCCTGGAGTCAGCTCTTTTGATTCCA CCTTGGAAAGACCCCAGGAAGCATAAGGTCATGGCGAGTGAGCACACAGTGGTTCTCACC GTCACGGGGGAGCCCTGTCACTTCCCCTTCCAGTACCACCGGCAGCTGTATTACAAGTGC ATCCAAAGAGGCCAGCGTGGCCCCCGACCCTGGTGTGCTACAACCCCCAACTTCGAGAAG GACCAGCGATGGGCATACTGCCTGGAGCCCATGAAAGTGAAAGACCACTGCAACAAAGGC AACCCCTGCCAGAAAGGAGGGACCTGTGTGAACATGCCAAATGGCCCACACTGCATCTGT CCAGATCACTTCACTGGGAAGCACTGTCAGAAAGAGAAGTGCTTCGAGCCCCAGTTCCTC CAGTTCTTTCAAGAGAATGAAATATGGCATAGGTTTGAGCCTGCTGGTGTGTCCAAGTGC CAGTGCAAAGGTCCTAAGGCCCAATGCAAGCCAGTGGCCAGCCAGGTCTGCAGCACCAAC CCGTGTCTCAATGGGGGCAGCTGCCTGCAGACTGAGGGCCACCGCCTGTGTCGTTGCCCC ACTGGCTATGCAGGACGCCTGTGTGACGTGGACCTCAAGGAGAGGTGCTACAGTGACCGG GGGCTCAGCTACCGCGGCATGGCCCAGACTACGCTCTCGGGAGCACCCTGTCAGCCGTGG GCCTCGGAGGCCACCTACTGGAACATGACCGCAGAGCAAGCTCTGAACTGGGGACTGGGA GACCATGCCTTCTGCCGGAACCCG |
| Aligned organism(s): 30 entry(ies) | More info |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
| 393-526, gnl|bosTau2|chr7 (21649212-21649079) | |
| 393-526, gnl|canFam2|chr4 (39147027-39146779) | |
| 393-526, gnl|dasNov1|scaffold_31231 (17259-17509) | |
| 393-526, gnl|echTel1|scaffold_260388 (857-605) | |
| 393-526, gnl|hg17|chr5 (176764581-176764828) | |
| 393-526, gnl|Hg17|chr5 (176764794-176764661) | |
| 393-526, gnl|loxAfr1|scaffold_37694 (20386-20634) | |
| 393-526, gnl|mm7|chr13 (54502392-54502637) | |
| 393-526, gnl|Mm7|chr13 (54502614-54502481) | |
| 393-526, gnl|monDom2|scaffold_6 (17171184-17171433) | |
| 393-526, gnl|oryCun1|scaffold_203910 (151657-151887) | |
| 393-526, gnl|panTro1|chr4 (184239190-184239437) | |
| 393-526, gnl|rheMac2|chr6 (173932645-173932892) | |
| 393-526, gnl|rn3|chr17 (15255700-15255475) | |
| 631-798, gnl|bosTau2|chr7 (21648666-21648493) | |
| 631-798, gnl|canFam2|chr4 (39147479-39147297) | |
| 631-798, gnl|dasNov1|scaffold_31231 (16767-16949) | |
| 631-798, gnl|echTel1|scaffold_260388 (1311-1129) | |
| 631-798, gnl|fr1|chrUn (1459156-1458962) | |
| 631-798, gnl|hg17|chr5 (176764101-176764283) | |
| 631-798, gnl|Hg17|chr5 (176764272-176764105) | |
| 631-798, gnl|loxAfr1|scaffold_37694 (19857-20039) | |
| 631-798, gnl|mm7|chr13 (54501966-54502148) | |
| 631-798, gnl|Mm7|chr13 (54502137-54501970) | |
| 631-798, gnl|monDom2|scaffold_6 (17168783-17168965) | |
| 631-798, gnl|oryCun1|scaffold_203910 (151202-151384) | |
| 631-798, gnl|panTro1|chr4 (184238710-184238892) | |
| 631-798, gnl|rheMac2|chr6 (173932165-173932347) | |
| 631-798, gnl|rn3|chr17 (15256128-15255946) | |
| 631-798, gnl|tetNig1|chrUn_random (126092895-126092729) |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 393-526, gnl|bosTau2|chr7 (21649212-21649079) | |
| 393-526, gnl|canFam2|chr4 (39147027-39146779) | |
| 393-526, gnl|dasNov1|scaffold_31231 (17259-17509) | |
| 393-526, gnl|echTel1|scaffold_260388 (857-605) | |
| 393-526, gnl|hg17|chr5 (176764581-176764828) | |
| 393-526, gnl|Hg17|chr5 (176764794-176764661) | |
| 393-526, gnl|loxAfr1|scaffold_37694 (20386-20634) | |
| 393-526, gnl|mm7|chr13 (54502392-54502637) | |
| 393-526, gnl|Mm7|chr13 (54502614-54502481) | |
| 393-526, gnl|monDom2|scaffold_6 (17171184-17171433) | |
| 393-526, gnl|oryCun1|scaffold_203910 (151657-151887) | |
| 393-526, gnl|panTro1|chr4 (184239190-184239437) | |
| 393-526, gnl|rheMac2|chr6 (173932645-173932892) | |
| 393-526, gnl|rn3|chr17 (15255700-15255475) | |
| 631-798, gnl|bosTau2|chr7 (21648666-21648493) | |
| 631-798, gnl|canFam2|chr4 (39147479-39147297) | |
| 631-798, gnl|dasNov1|scaffold_31231 (16767-16949) | |
| 631-798, gnl|echTel1|scaffold_260388 (1311-1129) | |
| 631-798, gnl|fr1|chrUn (1459156-1458962) | |
| 631-798, gnl|hg17|chr5 (176764101-176764283) | |
| 631-798, gnl|Hg17|chr5 (176764272-176764105) | |
| 631-798, gnl|loxAfr1|scaffold_37694 (19857-20039) | |
| 631-798, gnl|mm7|chr13 (54501966-54502148) | |
| 631-798, gnl|Mm7|chr13 (54502137-54501970) | |
| 631-798, gnl|monDom2|scaffold_6 (17168783-17168965) | |
| 631-798, gnl|oryCun1|scaffold_203910 (151202-151384) | |
| 631-798, gnl|panTro1|chr4 (184238710-184238892) | |
| 631-798, gnl|rheMac2|chr6 (173932165-173932347) | |
| 631-798, gnl|rn3|chr17 (15256128-15255946) | |
| 631-798, gnl|tetNig1|chrUn_random (126092895-126092729) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fli (0.202881) |