Non-Coding RNA Search

Ss1.1-Pig4-TMW8042G20.3

Sequence:


               
               CCAAGCCCCGCGCCGCGCTCCCCCCGCGATCTGCGTTCCTTACCGGGAGTCGCCGGTGCC
GTCGCCTTCCTGGCGCCGCCCCCGCCCCTCCGCGCGAGGCCGGGGGCAGAATGGGCGTCT
CGCCTCTTCTCACGAAACAAAGAAGCCGCCGCTGCCGCCGCCAAGCGAGGCAGTAAATAC
TACGGAACCACACCAGGCAAGGTTGGATCAGTCTGAGGATCTGGAACCTCGGATATCTGG
GAGCCGTCATTTGTGCTAATGAATAGCAGTTGGTATCAGCCACTGGATTCTGCCCGAGAT
GGAGCAAGGGACACAGCACCCTTGTAGCCGCCCTGCTGGAAATCTCAAAAGGGCAAATCC
AGGACTTCTGCTATAGCTTGGCAGCGAGTTCTCCAGAAACGCCAACTGGTAGGTTCTATG
AACTCGAGACAGCCTCTGCAGGATGCCTGTGCCTCCTCAGCTCTGAGTAAGATTCCAAGA
CCAAAGTACCACATCTGTTTTTCAACCCCTGATGATGTGATTGATTCAGATCTTGATGAA
AAATGATAAAGCCATCAGCTGGAAGGCTGATAGGGAACCTCACGGGAGGGACCACTTTGG
CAGTGGGACATGCAGACCTACCATGCCTCCTTATGTCTGTGTCGTCAGCCAGAGCACCCC
CTGAGCTAGAACTTGCTGGAAGAGTTGAATGTGATTCTAATAAATCCTCTTGAGTTGTGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCAAGCCCCGCGCCGCGCTCCCCCCGCGATCTGCGTTCCTTACCGGGAGTCGCCGGTGCC
GTCGCCTTCCTGGCGCCGCCCCCGCCCCTCCGCGCGAGGCCGGGGGCAGAATGGGCGTCT
CGCCTCTTCTCACGAAACAAAGAAGCCGCCGCTGCCGCCGCCAAGCGAGGCAGTAAATAC
TACGGAACCACACCAGGCAAGGTTGGATCAGTCTGAGGATCTGGAACCTCGGATATCTGG
GAGCCGTCATTTGTGCTAATGAATAGCAGTTGGTATCAGCCACTGGATTCTGCCCGAGAT
GGAGCAAGGGACACAGCACCCTTGTAGCCGCCCTGCTGGAAATCTCAAAAGGGCAAATCC
AGGACTTCTGCTATAGCTTGGCAGCGAGTTCTCCAGAAACGCCAACTGGTAGGTTCTATG
AACTCGAGACAGCCTCTGCAGGATGCCTGTGCCTCCTCAGCTCTGAGTAAGATTCCAAGA
CCAAAGTACCACATCTGTTTTTCAACCCCTGATGATGTGATTGATTCAGATCTTGATGAA
AAATGATAAAGCCATCAGCTGGAAGGCTGATAGGGAACCTCACGGGAGGGACCACTTTGG
CAGTGGGACATGCAGACCTACCATGCCTCCTTATGTCTGTGTCGTCAGCCAGAGCACCCC
CTGAGCTAGAACTTGCTGGAAGAGTTGAATGTGATTCTAATAAATCCTCTTGAGTTGTGG

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               1-170, gnl|bosTau2|chr7 (10086984-10086815)
               

               
               1-170, gnl|Hg17|chr19 (10932893-10932727)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-170, gnl|bosTau2|chr7 (10086984-10086815)
               

               
               1-170, gnl|Hg17|chr19 (10932893-10932727)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               tes (0.207814)
               

               
               fbs (0.175346)
               

               
               hyp (0.142837)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)
               

               
               fbs (0.175346)
               

               
               hyp (0.142837)

	1-170, gnl\|bosTau2\|chr7 (10086984-10086815)
	1-170, gnl\|Hg17\|chr19 (10932893-10932727)