Ss1.1-Pig4-TMW8042I16.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCAAGAGGGCCGTCTCCACTTTATGTTCGACCTTGGGAAGGGCAGGACAAAGGTCTGGCA CCCTGCGCTCCTCAGCGACGGCCAGTGGCACACGGTCAAGACTGAGTACTTCAAAAGGAA GGGCTTCCTGACGGTCGACGGCCAGGATTCCCCCATGGTGACCACAGTAGGAGATGCCAC CACCCTGGATGTGGAAGGAAAGTTGTACCTGGGAGGCCTGCCCTCCGAGTACAGGGCCAG GAACATTGGAAATATCACCCACAGCATTCCTGCTTGCATTGGGGAGGTGGCAGTAAACAG TAAACAGCTGGACAAGGACAGCCCGGAGTCTGCATCTGCGGTAAGCAGGTGCTATGCAGC AGCCGAGGAAGGAACTTTCTTCGAAGGAAGTGGATATGCGGCCTTTGTCAAAGAAGGCTA CAAAGTGAGATCCGATGTGAACATCACGCTGGAGTTCCGTACCTCCTCTGAGAACGGGGT CCTCCTGGGGATCAGCAGCGCCAAGGTGGATGCCATTGGCTTAGAGATCGTAAATGGCAA GCTCTTGTTTCACGTCAACAACGGTGCTGGTAGGATAACAGCCACATACGAGCCCAAAGC TCCCCATACTCTCTGCGATGGAAAGTGGCACAGGCTTCAGGCAAACAAAAGCAAACACCG CGTGCTTCTGATGGTCGATGGGAACACAGTTCGAGCTGAAAGTCCACACACCCAGTCCAC CTCTGCTGACACCAACAATCCCATTTATGTGGGCGGCTATCCTGCTGATGTAAAGCAAAA CTGCCTGAGCAGCCAGACCTCCTTCCGGGGCTGTCTGCGGAAGCTCACTCTGATTAAGGG TCCCCAAGTGCAATCCTATGACTTCAGCACAGCCTTCCATCTCCAAGGAGTCTCCCCTCA CTCCTGTCCTGGGACTGAGTCCTGAACTTTGGGGGAGCTCCTCATTTGGGAACTGTCATC TCTATTTTGAGGAGAATTATTTTGTGAATCAAAATCTTTGCAGTTCGGAGTTCATTGCCA ACTCAGGTTAAGTGTCTCCAGAGAGAAATGTTGTGTTTATGTTAAACTAAAACCATGTGT ACAACAGATACCTCTATTAAATAGTTTAAAATGCAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCAAGAGGGCCGTCTCCACTTTATGTTCGACCTTGGGAAGGGCAGGACAAAGGTCTGGCA CCCTGCGCTCCTCAGCGACGGCCAGTGGCACACGGTCAAGACTGAGTACTTCAAAAGGAA GGGCTTCCTGACGGTCGACGGCCAGGATTCCCCCATGGTGACCACAGTAGGAGATGCCAC CACCCTGGATGTGGAAGGAAAGTTGTACCTGGGAGGCCTGCCCTCCGAGTACAGGGCCAG GAACATTGGAAATATCACCCACAGCATTCCTGCTTGCATTGGGGAGGTGGCAGTAAACAG TAAACAGCTGGACAAGGACAGCCCGGAGTCTGCATCTGCGGTAAGCAGGTGCTATGCAGC AGCCGAGGAAGGAACTTTCTTCGAAGGAAGTGGATATGCGGCCTTTGTCAAAGAAGGCTA CAAAGTGAGATCCGATGTGAACATCACGCTGGAGTTCCGTACCTCCTCTGAGAACGGGGT CCTCCTGGGGATCAGCAGCGCCAAGGTGGATGCCATTGGCTTAGAGATCGTAAATGGCAA GCTCTTGTTTCACGTCAACAACGGTGCTGGTAGGATAACAGCCACATACGAGCCCAAAGC TCCCCATACTCTCTGCGATGGAAAGTGGCACAGGCTTCAGGCAAACAAAAGCAAACACCG CGTGCTTCTGATGGTCGATGGGAACACAGTTCGAGCTGAAAGTCCACACACCCAGTCCAC CTCTGCTGACACCAACAATCCCATTTATGTGGGCGGCTATCCTGCTGATGTAAAGCAAAA CTGCCTGAGCAGCCAGACCTCCTTCCGGGGCTGTCTGCGGAAGCTCACTCTGATTAAGGG TCCCCAAGTGCAATCCTATGACTTCAGCACAGCCTTCCATCTCCAAGGAGTCTCCCCTCA CTCCTGTCCTGGGACTGAGTCCTGAACTTTGGGGGAGCTCCTCATTTGGGAACTGTCATC TCTATTTTGAGGAGAATTATTTTGTGAATCAAAATCTTTGCAGTTCGGAGTTCATTGCCA ACTCAGGTTAAGTGTCTCCAGAGAGAAATGTTGTGTTTATGTTAAACTAAAACCATGTGT ACAACAGATACCTCTATTAAATAGTTTAAAATGCAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 94-252, gnl|bosTau2|chr11 (31131528-31131686) | |
| 94-252, gnl|Hg17|chr18 (6939259-6939101) | |
| 94-252, gnl|Mm7|chr17 (66088371-66088529) | |
| 254-403, gnl|bosTau2|chr11 (31132532-31132681) | |
| 254-403, gnl|canFam2|chr7 (76356421-76356605) | |
| 254-403, gnl|danRer3|chr5 (746864-747045) | |
| 254-403, gnl|dasNov1|scaffold_50483 (809-624) | |
| 254-403, gnl|echTel1|scaffold_184896 (475-656) | |
| 254-403, gnl|galGal2|chr2 (98624692-98624505) | |
| 254-403, gnl|hg17|chr18 (6938393-6938580) | |
| 254-403, gnl|Hg17|chr18 (6938555-6938406) | |
| 254-403, gnl|loxAfr1|scaffold_2247 (63402-63253) | |
| 254-403, gnl|mm7|chr17 (66089060-66088873) | |
| 254-403, gnl|Mm7|chr17 (66088896-66089045) | |
| 254-403, gnl|monDom2|scaffold_21 (26369974-26369807) | |
| 254-403, gnl|oryCun1|scaffold_207527 (89163-88976) | |
| 254-403, gnl|panTro1|chr17 (5739465-5739278) | |
| 254-403, gnl|rheMac2|chr18 (7350240-7350053) | |
| 254-403, gnl|rn3|chr9 (107183714-107183527) | |
| 254-403, gnl|xenTro1|scaffold_345 (127564-127382) | |
| 757-1116, gnl|bosTau2|chr11 (31136831-31137193) | |
| 757-1116, gnl|Hg17|chr18 (6932246-6931886) | |
| 757-1116, gnl|Mm7|chr17 (66093650-66094010) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 94-252, gnl|bosTau2|chr11 (31131528-31131686) | |
| 94-252, gnl|Hg17|chr18 (6939259-6939101) | |
| 94-252, gnl|Mm7|chr17 (66088371-66088529) | |
| 254-403, gnl|bosTau2|chr11 (31132532-31132681) | |
| 254-403, gnl|canFam2|chr7 (76356421-76356605) | |
| 254-403, gnl|danRer3|chr5 (746864-747045) | |
| 254-403, gnl|dasNov1|scaffold_50483 (809-624) | |
| 254-403, gnl|echTel1|scaffold_184896 (475-656) | |
| 254-403, gnl|galGal2|chr2 (98624692-98624505) | |
| 254-403, gnl|hg17|chr18 (6938393-6938580) | |
| 254-403, gnl|Hg17|chr18 (6938555-6938406) | |
| 254-403, gnl|loxAfr1|scaffold_2247 (63402-63253) | |
| 254-403, gnl|mm7|chr17 (66089060-66088873) | |
| 254-403, gnl|Mm7|chr17 (66088896-66089045) | |
| 254-403, gnl|monDom2|scaffold_21 (26369974-26369807) | |
| 254-403, gnl|oryCun1|scaffold_207527 (89163-88976) | |
| 254-403, gnl|panTro1|chr17 (5739465-5739278) | |
| 254-403, gnl|rheMac2|chr18 (7350240-7350053) | |
| 254-403, gnl|rn3|chr9 (107183714-107183527) | |
| 254-403, gnl|xenTro1|scaffold_345 (127564-127382) | |
| 757-1116, gnl|bosTau2|chr11 (31136831-31137193) | |
| 757-1116, gnl|Hg17|chr18 (6932246-6931886) | |
| 757-1116, gnl|Mm7|chr17 (66093650-66094010) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| mcp (0.170648) |