Non-Coding RNA Search

Ss1.1-Pig4-TMW8043F19.3

Sequence:


               
               AGATACTGAAAGAATACATACATTTAGAAACTGCTGGGTGCTTTACGTACATACAGAGGA
CAAGAATTCATAGAGAAGTCATCCCAGTGGACAAAGGGAAAGGAGAGGCAATGGGTCCAG
CACATCAAGCCCAAACAGTTACACCACAGATAGGAAACTGGGTCAGCTGAGGCTGAAGGT
CAAAATGTTTCACATGCGAAAAATGAGTTGACACCATGCCAATGGCACAGGCCTTTTCGT
TCGTTCTTTCTTTTCAAGTGTCTGTGGGCTATGTGAAGCAGAGCCGCTCCTCTCCCAGCC
CCACAGGAAGTGGTTTGGATGTAACCCTAGCAGAGGCAGGACTAACTCTTTAGGCCCCTT
TCCAGCTCTGGAATCCCATGATACTAGAGCTTATTGATTTTTTTCTTCTCTCCCAGGACC
ATAACTAATCAGATGGAGGAGACTTAAAGATAACAGAATGGGAAGCAGCATGCAAAGCCT
GACCTGGGTGGACTGAAAAGACTAAGCGAGAGGAATAGGCACAGTGCAGGACCAGGCAGC
TAAAGACTTGTTAAAACATCAGGTCAAACCAGGACCTTCCTCGGGCCGTGACTGACCGAC
AGGCTGATACATCCGAAGACCTATTCCCCCTTGCTGGACTGAACGCCTTTCCCAGTGTGT
CTTCCTCCGCAACGTACTGCCGCTTACTGTCAAAATTGTTTCTCTCTCAGGGTACGATGT
TGCAGACTGCTCTGCTCTGGCGCATTTTTGTATCCCCAAGATGTCCCGCAGGCCTTGAAA
TAGAAGTGGTTAATAAAACAAGGAAATATCGAGTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGATACTGAAAGAATACATACATTTAGAAACTGCTGGGTGCTTTACGTACATACAGAGGA
CAAGAATTCATAGAGAAGTCATCCCAGTGGACAAAGGGAAAGGAGAGGCAATGGGTCCAG
CACATCAAGCCCAAACAGTTACACCACAGATAGGAAACTGGGTCAGCTGAGGCTGAAGGT
CAAAATGTTTCACATGCGAAAAATGAGTTGACACCATGCCAATGGCACAGGCCTTTTCGT
TCGTTCTTTCTTTTCAAGTGTCTGTGGGCTATGTGAAGCAGAGCCGCTCCTCTCCCAGCC
CCACAGGAAGTGGTTTGGATGTAACCCTAGCAGAGGCAGGACTAACTCTTTAGGCCCCTT
TCCAGCTCTGGAATCCCATGATACTAGAGCTTATTGATTTTTTTCTTCTCTCCCAGGACC
ATAACTAATCAGATGGAGGAGACTTAAAGATAACAGAATGGGAAGCAGCATGCAAAGCCT
GACCTGGGTGGACTGAAAAGACTAAGCGAGAGGAATAGGCACAGTGCAGGACCAGGCAGC
TAAAGACTTGTTAAAACATCAGGTCAAACCAGGACCTTCCTCGGGCCGTGACTGACCGAC
AGGCTGATACATCCGAAGACCTATTCCCCCTTGCTGGACTGAACGCCTTTCCCAGTGTGT
CTTCCTCCGCAACGTACTGCCGCTTACTGTCAAAATTGTTTCTCTCTCAGGGTACGATGT
TGCAGACTGCTCTGCTCTGGCGCATTTTTGTATCCCCAAGATGTCCCGCAGGCCTTGAAA
TAGAAGTGGTTAATAAAACAAGGAAATATCGAGTGT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-563, gnl|bosTau2|chr3 (7621166-7620600)
               

               
               1-563, gnl|Hg17|chr1 (157955851-157956397)
               

               
               1-563, gnl|Mm7|chr1 (171245235-171244543)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-563, gnl|bosTau2|chr3 (7621166-7620600)
               

               
               1-563, gnl|Hg17|chr1 (157955851-157956397)
               

               
               1-563, gnl|Mm7|chr1 (171245235-171244543)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               col (0.195008)
               

               
               ute (0.132784)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               col (0.195008)
               

               
               ute (0.132784)

	1-563, gnl\|bosTau2\|chr3 (7621166-7620600)
	1-563, gnl\|Hg17\|chr1 (157955851-157956397)
	1-563, gnl\|Mm7\|chr1 (171245235-171244543)