Non-Coding RNA Search

Ss1.1-Pig4-TMW8043I12.3

Sequence:


               
               AGCTCACACCAACGCCATGGCTCCCAGCATGGGTTCCTCCGTCAATGACGCTTTAAAGAG
AGATAAAGATGCCATTTATGGGTAGGTACGATGGGCGGCAGGTTAAAGAGTTGAGAGGCG
ATGCTTCTCCTGTTTCCCTTTGCCCTTGGTCAGAGGAAAGCCAGAGCTCTCTGGACTGGA
GGTACATTATTTGGTGACTTTTCATTCGCTTTGCATGGAGATCTGGGGGAGGCGGCCTGC
CATTTCAGACGCCCCCCATCTCCGCACACGCTCCGCGCGCGCCCAGTGCCCCGCGCCACC
GAGGCCCTGTCCGCGGAGGGGTCGCGGTGCAGGAGTTGCCAAAGGTCCCTTGTCCCCTCA
GACCCTGGCTCGGTCGCTCAGCCGGTTGGACTCCTCACTCCTTGACTTTGCTGAGAGAGT
GTTGGGGCTTTCTAAATGTAGGCGCCTTTGTGTTGGAACGAAACTTTTAGTTTAAAGGAA
AATCTTTTAAGCCACTGATTGTTCTGACTTGCTAAGTTTACTCAGCCACCGTATGCTGGC
TCTGCCACCGCACAATAAAATCAAGGGAGGACAGTTGCAGGTCAGGCAAGGGGGAAGAGG
CTTTGCATTTAGGGGGTTTGACCACTGTGGTCAAGGAGAGGAGCTCGCTTTGAATTGTTA
TAGACCTTCAGAAACTCCTAGCCGTTTTAGTACTTTGTATTCAAAGGCTAAACCTGCAGG
ATTTGGAAGTAGAGGCGGGGTGCTCTCGGGCCAGTGTTGTTTTCCGCTGCGTTCACCCCG
TATTCTCCCCCGCCATTCGGTTAGACCCTGGGCTAGTAAAACCCTTTGAAAGTCACTTGT
GCCTACTGTGTGCTGATGCGTGTGGGGACCTCTTTTTACTTTGCAGCCACTTTCAGTTCT
ATTTATTTCTTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCTCACACCAACGCCATGGCTCCCAGCATGGGTTCCTCCGTCAATGACGCTTTAAAGAG
AGATAAAGATGCCATTTATGGGTAGGTACGATGGGCGGCAGGTTAAAGAGTTGAGAGGCG
ATGCTTCTCCTGTTTCCCTTTGCCCTTGGTCAGAGGAAAGCCAGAGCTCTCTGGACTGGA
GGTACATTATTTGGTGACTTTTCATTCGCTTTGCATGGAGATCTGGGGGAGGCGGCCTGC
CATTTCAGACGCCCCCCATCTCCGCACACGCTCCGCGCGCGCCCAGTGCCCCGCGCCACC
GAGGCCCTGTCCGCGGAGGGGTCGCGGTGCAGGAGTTGCCAAAGGTCCCTTGTCCCCTCA
GACCCTGGCTCGGTCGCTCAGCCGGTTGGACTCCTCACTCCTTGACTTTGCTGAGAGAGT
GTTGGGGCTTTCTAAATGTAGGCGCCTTTGTGTTGGAACGAAACTTTTAGTTTAAAGGAA
AATCTTTTAAGCCACTGATTGTTCTGACTTGCTAAGTTTACTCAGCCACCGTATGCTGGC
TCTGCCACCGCACAATAAAATCAAGGGAGGACAGTTGCAGGTCAGGCAAGGGGGAAGAGG
CTTTGCATTTAGGGGGTTTGACCACTGTGGTCAAGGAGAGGAGCTCGCTTTGAATTGTTA
TAGACCTTCAGAAACTCCTAGCCGTTTTAGTACTTTGTATTCAAAGGCTAAACCTGCAGG
ATTTGGAAGTAGAGGCGGGGTGCTCTCGGGCCAGTGTTGTTTTCCGCTGCGTTCACCCCG
TATTCTCCCCCGCCATTCGGTTAGACCCTGGGCTAGTAAAACCCTTTGAAAGTCACTTGT
GCCTACTGTGTGCTGATGCGTGTGGGGACCTCTTTTTACTTTGCAGCCACTTTCAGTTCT
ATTTATTTCTTA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-910, gnl|bosTau2|chr11 (47054932-47054011)
               

               
               1-910, gnl|Hg17|chr2 (66576666-66577575)
               

               
               1-910, gnl|Mm7|chr11 (18968222-18967378)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-910, gnl|bosTau2|chr11 (47054932-47054011)
               

               
               1-910, gnl|Hg17|chr2 (66576666-66577575)
               

               
               1-910, gnl|Mm7|chr11 (18968222-18967378)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cki (0.165235)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cki (0.165235)

	1-910, gnl\|bosTau2\|chr11 (47054932-47054011)
	1-910, gnl\|Hg17\|chr2 (66576666-66577575)
	1-910, gnl\|Mm7\|chr11 (18968222-18967378)