Ss1.1-Pig4-TMW8043K06.3
|
GATCGTCCCTTATATCTTCATGTCCAAGGCCAGACACGTGAATTAGTAGACAGAGCTGTA
AACAGAATCAAAGAAATTATTACCAATGGGGTGGTCAAAGCTGCAACAGGGACAAGTCCC
ACTTTTAATGGTGCAACAGTCACTGTCTATCACCAGCCAGCGCCCATTGCACAGCTGTCC
CCAGCTGTTAGCCAGAAGCCTCCCTTCCAGTCAGGGATGCATTATGTTCAAGATAAATTA
TTCGTGGGTCTAGAACATGCCGTGCCCACTTTTAATGTCAAGGAGAAAGTGGAAGGTCCA
TGCTGCTCCTATTTGCAGCACATTCAGATTGAAACCGGTGCCAAAGTCTTCCTACGAGGA
AAAGGTTCGGGCTGCATTGAGCCATCATCTGGCCGAGAAGCTTTTGAACCTATGTACATT
TACATCAGTCATCCCAAACCATAAAGCCTGGCTGCTGCCAAGAAGCTCTGTGAGAATCTC
TTGCAAACAGTTCATGCTGAATACTCTAGATTTGTGAATCAGATTAATACTGCCGTCCCT
TTACCAGGCTATACACAACCCTCTGCTATAAGTAGTGTCCCTCCTCAACCACCATATTAT
CCATCCAATGGCTATCAGTCTGGTTACCCTGTTGTTCCCCCTCCTCAGCAGCCAGTTCAA
CCTCCCTATGGAGTACCAAGCATAGTGCCACCAGCTGTTTCTTTGGCACCTGGAGTCTTG
CCAGCATTACCTACTGGAGTTCCACCTGTGCCAACACAATACCCGATAACACAAGTGCAG
CCTCCAGCTAGCACTGGACAGAGTCCGATGAGTGGGCCTTTTATTCCTGCTGCTCCTGTC
AAAACTGCCTTGCCTGCCGGCCCCCAGCCCCCGCCCCCGCCCCAGCCCCAGCCCCCACTC
CCAAGTCAACCCCAGGCACAGAAGAGGCGATTCACAGAGGAGCTACCAGATGAACGAGAA
TCTGGACTTCTTGGATACCAGGTTAAATAAAATATCCTGTCTTATTTTCTTCATCTTAAC
CAACTGTATTCTCCCTTAAAAGAAAGATAAATTCACATTTATATCAACCGTCCTCCCAAT
ACTAGGATTTCTGCTTTCTGGAATCTGTTTAGAATAGATCATTCATCCTTGGGGAATAAT
TTAAAGCGAGAGTGATTCCCTTTGTGCAGGTTTTAATCTTTGGGGTCAGTGTGATAAGAG
AACACAAAGCTCTCCACCTAGAGATAAGTCTCCTGTGACTAACATCTGGAAGTTCTGTAG
AATTGTGCACTTCCTTTTTATGCAGCAGACTTGAAAGCCTCTGATAGTTTTTAGTGAAAT
ACGTAGGGAAGAGCTAGCATTCTACCATTATGGTTTGTATTTAAAACCTTGGCTTTCAAT
TTGCTGTTCTCTTTCTCCCTCCTAAAAAGGAGGGTGATGCCTTTCTCCAATTCCTACACC |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GATCGTCCCTTATATCTTCATGTCCAAGGCCAGACACGTGAATTAGTAGACAGAGCTGTA
AACAGAATCAAAGAAATTATTACCAATGGGGTGGTCAAAGCTGCAACAGGGACAAGTCCC
ACTTTTAATGGTGCAACAGTCACTGTCTATCACCAGCCAGCGCCCATTGCACAGCTGTCC
CCAGCTGTTAGCCAGAAGCCTCCCTTCCAGTCAGGGATGCATTATGTTCAAGATAAATTA
TTCGTGGGTCTAGAACATGCCGTGCCCACTTTTAATGTCAAGGAGAAAGTGGAAGGTCCA
TGCTGCTCCTATTTGCAGCACATTCAGATTGAAACCGGTGCCAAAGTCTTCCTACGAGGA
AAAGGTTCGGGCTGCATTGAGCCATCATCTGGCCGAGAAGCTTTTGAACCTATGTACATT
TACATCAGTCATCCCAAACCATAAAGCCTGGCTGCTGCCAAGAAGCTCTGTGAGAATCTC
TTGCAAACAGTTCATGCTGAATACTCTAGATTTGTGAATCAGATTAATACTGCCGTCCCT
TTACCAGGCTATACACAACCCTCTGCTATAAGTAGTGTCCCTCCTCAACCACCATATTAT
CCATCCAATGGCTATCAGTCTGGTTACCCTGTTGTTCCCCCTCCTCAGCAGCCAGTTCAA
CCTCCCTATGGAGTACCAAGCATAGTGCCACCAGCTGTTTCTTTGGCACCTGGAGTCTTG
CCAGCATTACCTACTGGAGTTCCACCTGTGCCAACACAATACCCGATAACACAAGTGCAG
CCTCCAGCTAGCACTGGACAGAGTCCGATGAGTGGGCCTTTTATTCCTGCTGCTCCTGTC
AAAACTGCCTTGCCTGCCGGCCCCCAGCCCCCGCCCCCGCCCCAGCCCCAGCCCCCACTC
CCAAGTCAACCCCAGGCACAGAAGAGGCGATTCACAGAGGAGCTACCAGATGAACGAGAA
TCTGGACTTCTTGGATACCAGGTTAAATAAAATATCCTGTCTTATTTTCTTCATCTTAAC
CAACTGTATTCTCCCTTAAAAGAAAGATAAATTCACATTTATATCAACCGTCCTCCCAAT
ACTAGGATTTCTGCTTTCTGGAATCTGTTTAGAATAGATCATTCATCCTTGGGGAATAAT
TTAAAGCGAGAGTGATTCCCTTTGTGCAGGTTTTAATCTTTGGGGTCAGTGTGATAAGAG
AACACAAAGCTCTCCACCTAGAGATAAGTCTCCTGTGACTAACATCTGGAAGTTCTGTAG
AATTGTGCACTTCCTTTTTATGCAGCAGACTTGAAAGCCTCTGATAGTTTTTAGTGAAAT
ACGTAGGGAAGAGCTAGCATTCTACCATTATGGTTTGTATTTAAAACCTTGGCTTTCAAT
TTGCTGTTCTCTTTCTCCCTCCTAAAAAGGAGGGTGATGCCTTTCTCCAATTCCTACACC |
|
gi|31281050|gb|AAM51856.1| |
Protein identifier
|
gi|31281050|gb|AAM51856.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
53-226, gnl|bosTau2|chr3 (10687373-10687548) |
|
53-226, gnl|Hg17|chr1 (152709703-152709528) |
|
53-226, gnl|Mm7|chr3 (88807222-88807397) |
| |
|
238-428, gnl|bosTau2|chr3 (10688649-10688839) |
|
238-428, gnl|canFam2|chr7 (44854841-44854687) |
|
238-428, gnl|danRer3|chrNA (22674722-22674875) |
|
238-428, gnl|dasNov1|scaffold_41088 (10069-9918) |
|
238-428, gnl|echTel1|scaffold_106638 (4-141) |
|
238-428, gnl|fr1|chrUn (197282164-197282318) |
|
238-428, gnl|galGal2|chrE26C13 (134957-135111) |
|
238-428, gnl|hg17|chr1 (152708494-152708648) |
|
238-428, gnl|loxAfr1|scaffold_18277 (41439-41593) |
|
238-428, gnl|mm7|chr3 (88810581-88810427) |
|
238-428, gnl|monDom2|scaffold_59 (1632840-1632686) |
|
238-428, gnl|oryCun1|scaffold_212139 (5937-5783) |
|
238-428, gnl|panTro1|chr1 (134641417-134641571) |
|
238-428, gnl|rheMac2|chr1 (134499927-134500081) |
|
238-428, gnl|rn3|chr2 (180767852-180767698) |
|
238-428, gnl|tetNig1|chr8 (8616960-8616806) |
|
238-428, gnl|xenTro1|scaffold_96 (1407012-1406858) |
| |
|
799-1440, gnl|bosTau2|chr3 (10693625-10694250) |
|
799-1440, gnl|Mm7|chr3 (88822578-88823161) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
53-226, gnl|bosTau2|chr3 (10687373-10687548) |
|
53-226, gnl|Hg17|chr1 (152709703-152709528) |
|
53-226, gnl|Mm7|chr3 (88807222-88807397) |
| |
|
238-428, gnl|bosTau2|chr3 (10688649-10688839) |
|
238-428, gnl|canFam2|chr7 (44854841-44854687) |
|
238-428, gnl|danRer3|chrNA (22674722-22674875) |
|
238-428, gnl|dasNov1|scaffold_41088 (10069-9918) |
|
238-428, gnl|echTel1|scaffold_106638 (4-141) |
|
238-428, gnl|fr1|chrUn (197282164-197282318) |
|
238-428, gnl|galGal2|chrE26C13 (134957-135111) |
|
238-428, gnl|hg17|chr1 (152708494-152708648) |
|
238-428, gnl|loxAfr1|scaffold_18277 (41439-41593) |
|
238-428, gnl|mm7|chr3 (88810581-88810427) |
|
238-428, gnl|monDom2|scaffold_59 (1632840-1632686) |
|
238-428, gnl|oryCun1|scaffold_212139 (5937-5783) |
|
238-428, gnl|panTro1|chr1 (134641417-134641571) |
|
238-428, gnl|rheMac2|chr1 (134499927-134500081) |
|
238-428, gnl|rn3|chr2 (180767852-180767698) |
|
238-428, gnl|tetNig1|chr8 (8616960-8616806) |
|
238-428, gnl|xenTro1|scaffold_96 (1407012-1406858) |
| |
|
799-1440, gnl|bosTau2|chr3 (10693625-10694250) |
|
799-1440, gnl|Mm7|chr3 (88822578-88823161) |
|
ese (0.126502) |
|
eep (0.122564) |
|
ese (0.126502) |
|
eep (0.122564) |
