Ss1.1-Pig4-TMW8043L16.5.5
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TTTCACAAGGACACGATTTTAATAATGACTTATATTAAGATGCAATGTCTGCTAAATTAT
AAAAATTGCTTTAAAAATATATTGACTTAATTATACTCATTTCTTTTCCTTTATGTATTG
ACATTTTTCAAATACTGTATACTGAAATAAATTCAAAACATGATCATTACAACATGTGGC
AAATAATTTCATATCTGCCTAACATTGTTCTCAAATTTTAAACTAATGCTCAATGCATTA
AACTTTATTGATGAAAATACTACATTCACATATTTCATAAAACCAGAGCTAGAAGGGCCT
TAGAAAATAATCACACTTGCATGAAATGCTGACAAATAATTTACATATCGTTTCTATACA
GCATTCTGTTCACTCTTGACATTACCAATTATAGATACACTAATGTTGAACTTACAATTT
TAATACTTAGAAATCATTGTTCCTGTTCATCACTGATGAATGGATAAACAAAATGTGGTA
CACACATTCATACAATGGAATCTTATTCAGTTATAAAAAGAAATGAAGTTCGGATACATG
CTACATGGATGAACCTTGAAAACATGATGGTAAGTGAAAGAAGCCAGACACAAAAGGCCA
CGTATTGCATGATTCCATTTTTATGAAATGTCCCAAACAGGCAAATCCATAGAGACAGAA
AATACATTAGTCGTTTCCAGGGGCTGGGGGAAAGAGAATTGGGAGTGACTGCTAACAGGC
GTGGAGTCTGTTTCCAGGCTGATGGAAATGTTCTGGAATTAGTGGTGATGGTTACAACAT
TGTGAATATACTAAAAAACACTTCAAAATGGCAAATTTTATGTCATGGATTTTATCTCAA
TTTTTTAACTGCAAAAAAGTCAATGTTCCAATAAAGAGTATCATGGTATTATCAGTATGG
CCATAACTAGAATAAAAAAATGGGTTCAGAATCATGAAGATGTCACAATTACTGGGCAAG
GGAAATTTTGATGACGTATTTAAGGGCACACTGAAGGATAAAACTGCTATTGCTGTTAAA
ACATGTGAAGATGATCTTTCACAGGAACTGAAATTAAAATTTTTACAAGAAGCCAAAATC
CTCAAACAATATAATCATCCCAATATCGTCAAACTTATAGTTTGCACACAAATACAGCCT
ATCTACATAATTAAGGTACTGGTTCCAGGAGGCGTTTTCCTCTCCTTTCTGAGAAAGAAG
GATGAACTAAAACAGTGAAATTTTCATTAGATGCTGCTTCTGGATGGCGAATCTCGAGTA
AAAATTGTATACACAGGGACCTTGCTGCAAGAAACTGCCTGGAGGTGAAAGTAATGTTCT
GAAAATCAGTGACTTTGGAATGTCTCGTCAAGAGGATGGTGGTGTGTATTCATCTTCTGA
TTTAAAGCAGATTTCCATTAAATGGACAGCACCAGAAGCTCTTAATTATGGGAGATATCG
TTCTGAGAGTGACGCATGGAGCTTTGGCATCCTCCTCTGGGAGACTTTCAGCTTAGGGGT
CTGTCCATACCCTTGATTGAAAGTCTTCATTATCTGTGCTTGTCCGAGGACTTATGATGT
TTCTTCTCTTCC
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Blue-coloured subsequences are predicted RNA structures by RNAz
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TTTCACAAGGACACGATTTTAATAATGACTTATATTAAGATGCAATGTCTGCTAAATTAT
AAAAATTGCTTTAAAAATATATTGACTTAATTATACTCATTTCTTTTCCTTTATGTATTG
ACATTTTTCAAATACTGTATACTGAAATAAATTCAAAACATGATCATTACAACATGTGGC
AAATAATTTCATATCTGCCTAACATTGTTCTCAAATTTTAAACTAATGCTCAATGCATTA
AACTTTATTGATGAAAATACTACATTCACATATTTCATAAAACCAGAGCTAGAAGGGCCT
TAGAAAATAATCACACTTGCATGAAATGCTGACAAATAATTTACATATCGTTTCTATACA
GCATTCTGTTCACTCTTGACATTACCAATTATAGATACACTAATGTTGAACTTACAATTT
TAATACTTAGAAATCATTGTTCCTGTTCATCACTGATGAATGGATAAACAAAATGTGGTA
CACACATTCATACAATGGAATCTTATTCAGTTATAAAAAGAAATGAAGTTCGGATACATG
CTACATGGATGAACCTTGAAAACATGATGGTAAGTGAAAGAAGCCAGACACAAAAGGCCA
CGTATTGCATGATTCCATTTTTATGAAATGTCCCAAACAGGCAAATCCATAGAGACAGAA
AATACATTAGTCGTTTCCAGGGGCTGGGGGAAAGAGAATTGGGAGTGACTGCTAACAGGC
GTGGAGTCTGTTTCCAGGCTGATGGAAATGTTCTGGAATTAGTGGTGATGGTTACAACAT
TGTGAATATACTAAAAAACACTTCAAAATGGCAAATTTTATGTCATGGATTTTATCTCAA
TTTTTTAACTGCAAAAAAGTCAATGTTCCAATAAAGAGTATCATGGTATTATCAGTATGG
CCATAACTAGAATAAAAAAATGGGTTCAGAATCATGAAGATGTCACAATTACTGGGCAAG
GGAAATTTTGATGACGTATTTAAGGGCACACTGAAGGATAAAACTGCTATTGCTGTTAAA
ACATGTGAAGATGATCTTTCACAGGAACTGAAATTAAAATTTTTACAAGAAGCCAAAATC
CTCAAACAATATAATCATCCCAATATCGTCAAACTTATAGTTTGCACACAAATACAGCCT
ATCTACATAATTAAGGTACTGGTTCCAGGAGGCGTTTTCCTCTCCTTTCTGAGAAAGAAG
GATGAACTAAAACAGTGAAATTTTCATTAGATGCTGCTTCTGGATGGCGAATCTCGAGTA
AAAATTGTATACACAGGGACCTTGCTGCAAGAAACTGCCTGGAGGTGAAAGTAATGTTCT
GAAAATCAGTGACTTTGGAATGTCTCGTCAAGAGGATGGTGGTGTGTATTCATCTTCTGA
TTTAAAGCAGATTTCCATTAAATGGACAGCACCAGAAGCTCTTAATTATGGGAGATATCG
TTCTGAGAGTGACGCATGGAGCTTTGGCATCCTCCTCTGGGAGACTTTCAGCTTAGGGGT
CTGTCCATACCCTTGATTGAAAGTCTTCATTATCTGTGCTTGTCCGAGGACTTATGATGT
TTCTTCTCTTCC
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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443-835, gnl|bosTau2|chr1 (74928573-74928967) |
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443-835, gnl|hg17|chr3 (151530127-151530791) |
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443-835, gnl|Hg17|chr3 (151530404-151530760) |
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443-835, gnl|Mm7|chr3 (58448835-58449421) |
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443-835, gnl|panTro1|chr2 (154691954-154692618) |
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443-835, gnl|rheMac2|chr2 (137440410-137439748) |
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443-835, gnl|rn3|chr2 (147597600-147598182) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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443-835, gnl|bosTau2|chr1 (74928573-74928967) |
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443-835, gnl|hg17|chr3 (151530127-151530791) |
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443-835, gnl|Hg17|chr3 (151530404-151530760) |
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443-835, gnl|Mm7|chr3 (58448835-58449421) |
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443-835, gnl|panTro1|chr2 (154691954-154692618) |
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443-835, gnl|rheMac2|chr2 (137440410-137439748) |
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443-835, gnl|rn3|chr2 (147597600-147598182) |
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kid (0.259471) |
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mgp (0.230681) |
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mga (0.160205) |
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isp (0.150376) |
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ski (0.146735) |
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csk (0.140746) |
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ret (0.128733) |
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sug (0.127291) |
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tra (0.123092) |
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kid (0.259471) |
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mgp (0.230681) |
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mga (0.160205) |
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isp (0.150376) |
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ski (0.146735) |
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csk (0.140746) |
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ret (0.128733) |
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sug (0.127291) |
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tra (0.123092) |