Non-Coding RNA Search

Ss1.1-Pig4-TMW8043L19.5

Sequence:


               
               CTCTCCACTGACCGCCACCTCCGTGCTCACCGCTCGCGTTTCCCCGGCATCCGGAGGCCT
CCCCAGCCAAGGACTCCACAATGCTGGATATTTTCATCCTGATGTTCTTTGCCATCATAG
GCCTGGTCATTCTGTCCTATATTATCTATCTGCTCTAGGGGCCCGCAGCGGCGGCGTGGA
GCCCGCAGGAGAACAGCGCATGGGGGAAGGATGAAGCTGACTGGCGGAGGAGCATCCTGC
CTGCTGACGCATCGGTGGATTTTTGCTTCTGGTCATTATTTCGGCTCCTGGACTCTGGTG
CCACGAGAGGCCCCTTTATCAACAGCAGGAGTCCTGCTGTCCAGCAGACCTCTTCCAGAA
CCTTCCGGATATGGTTCGCCCTTGTCAAGCAAGGGGCTTTCTGAGTTCAGAGGCAGAGGC
AGTCGGCTGGGACGTCAGGAATTCACGGGCATGGCCGGCAGCTGCTGCATGCAATGAAGC
TTGTAGACACAGGGAGCGGAAATGTAGACTCGTTAAAGTTACCGTGGAGGATCGCTCCGA
AATTCATTCTGATAGCTTTTCCTGAAGTCTAAATGCCACCACATATGATGCTGCAATACG
TTCTTTCCTTTCTCTCTCACACGCAGGGGTTCCCTTGTGTTAAGTCCTAGAGCACATTAT
CTGTCTTCATCTATGAGGCGGTCACTTTATCACGGTCTTCAGGGATTACACAATCTGAGG
TTGTGTGGTTTCCCGTGTCTCACTCTCTAGAAGGAACTAGTCATTTGAGTTTTTAAGATT
TCTCATATCTTTCCAGACCCCTTGTGCTCCAGCATCTCATTCAAAGAGAGAAACAGTTAT
ATTGTCCTCATTCTTGGTGCCTAACTAAATTACAAATGATTGAAAAAAGATGGCTAGACT
TATCTTGTTATTTGGAAAAAAATCTCTCTCATACCCCCAAATAAATGTTTTTTATATGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCTCCACTGACCGCCACCTCCGTGCTCACCGCTCGCGTTTCCCCGGCATCCGGAGGCCT
CCCCAGCCAAGGACTCCACAATGCTGGATATTTTCATCCTGATGTTCTTTGCCATCATAG
GCCTGGTCATTCTGTCCTATATTATCTATCTGCTCTAGGGGCCCGCAGCGGCGGCGTGGA
GCCCGCAGGAGAACAGCGCATGGGGGAAGGATGAAGCTGACTGGCGGAGGAGCATCCTGC
CTGCTGACGCATCGGTGGATTTTTGCTTCTGGTCATTATTTCGGCTCCTGGACTCTGGTG
CCACGAGAGGCCCCTTTATCAACAGCAGGAGTCCTGCTGTCCAGCAGACCTCTTCCAGAA
CCTTCCGGATATGGTTCGCCCTTGTCAAGCAAGGGGCTTTCTGAGTTCAGAGGCAGAGGC
AGTCGGCTGGGACGTCAGGAATTCACGGGCATGGCCGGCAGCTGCTGCATGCAATGAAGC
TTGTAGACACAGGGAGCGGAAATGTAGACTCGTTAAAGTTACCGTGGAGGATCGCTCCGA
AATTCATTCTGATAGCTTTTCCTGAAGTCTAAATGCCACCACATATGATGCTGCAATACG
TTCTTTCCTTTCTCTCTCACACGCAGGGGTTCCCTTGTGTTAAGTCCTAGAGCACATTAT
CTGTCTTCATCTATGAGGCGGTCACTTTATCACGGTCTTCAGGGATTACACAATCTGAGG
TTGTGTGGTTTCCCGTGTCTCACTCTCTAGAAGGAACTAGTCATTTGAGTTTTTAAGATT
TCTCATATCTTTCCAGACCCCTTGTGCTCCAGCATCTCATTCAAAGAGAGAAACAGTTAT
ATTGTCCTCATTCTTGGTGCCTAACTAAATTACAAATGATTGAAAAAAGATGGCTAGACT
TATCTTGTTATTTGGAAAAAAATCTCTCTCATACCCCCAAATAAATGTTTTTTATATGCT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-284, gnl|bosTau2|chr19 (35585917-35585652)
               

               
               1-284, gnl|Hg17|chr17 (34335393-34335670)
               

               
               1-284, gnl|Mm7|chr11 (97950358-97950615)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-284, gnl|bosTau2|chr19 (35585917-35585652)
               

               
               1-284, gnl|Hg17|chr17 (34335393-34335670)
               

               
               1-284, gnl|Mm7|chr11 (97950358-97950615)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fcc (0.197785)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fcc (0.197785)

	1-284, gnl\|bosTau2\|chr19 (35585917-35585652)
	1-284, gnl\|Hg17\|chr17 (34335393-34335670)
	1-284, gnl\|Mm7\|chr11 (97950358-97950615)