Non-Coding RNA Search

Ss1.1-Pig4-TMW8043N07.3

Sequence:


               
               GATTTTTGCTGCATGTCAACACTTATTCCCGAAAATGGCCCGCTGATGATGTGACCCAGT
GTACCAGGACTAAGGCTTGGGGTGGTTTCCTTAGAATTCCAAGACTCCTTCTACCAATGC
CTCCTCTGACCAGAAGCAGCAAAGTCTTTCTGCCTCCATCAACAGTTTGCAGCGGCACCG
GACCCCCTGCACGCAGTCCTGGGCTGGATCCTTTATCCTTGTCCCTCTGGGGAGATGAGA
CCAAGAGCCGCTTCCACTGTCCCAGAGAAGACAGTGGAGCAGATACGGACGGAATGTGAC
TTGGAACCCCGGTTAGTGGCAACCCGGTTCTTGGGCTCTTTCCTCCGTTCTACTACTGTC
AACAGCCCCCTCAACTCTGCTTCCCTAGGCGGGTATCTGGGTGAAGTTCCTGCACTCAGT
TGAAGCTTGGTAGCATCGTTCTCGGTCCTCCCGGATGAACTGGCAGGGCCTTCCCTAATG
TCACTTTACGCGGCCGCCTGCGCTGGGTTGAAGGAGAGTCTCCCCTGACTGACTCGTCCC
GCTGCGTGCAGGCGCAGGAGGGGGGAGAGCCGATGGGGACGACCCTGCAGGCCGTCCTGA
GCGCCACAGACGGGGATTTACCTGCCGAGTCCAAGGCGACAGACAACAGATCACTTTGTT
AGAGAATAAGATAATATCAAACAAAAGAAAGTAAAATAAAACCCTTCTTATGAGCGGCAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATTTTTGCTGCATGTCAACACTTATTCCCGAAAATGGCCCGCTGATGATGTGACCCAGT
GTACCAGGACTAAGGCTTGGGGTGGTTTCCTTAGAATTCCAAGACTCCTTCTACCAATGC
CTCCTCTGACCAGAAGCAGCAAAGTCTTTCTGCCTCCATCAACAGTTTGCAGCGGCACCG
GACCCCCTGCACGCAGTCCTGGGCTGGATCCTTTATCCTTGTCCCTCTGGGGAGATGAGA
CCAAGAGCCGCTTCCACTGTCCCAGAGAAGACAGTGGAGCAGATACGGACGGAATGTGAC
TTGGAACCCCGGTTAGTGGCAACCCGGTTCTTGGGCTCTTTCCTCCGTTCTACTACTGTC
AACAGCCCCCTCAACTCTGCTTCCCTAGGCGGGTATCTGGGTGAAGTTCCTGCACTCAGT
TGAAGCTTGGTAGCATCGTTCTCGGTCCTCCCGGATGAACTGGCAGGGCCTTCCCTAATG
TCACTTTACGCGGCCGCCTGCGCTGGGTTGAAGGAGAGTCTCCCCTGACTGACTCGTCCC
GCTGCGTGCAGGCGCAGGAGGGGGGAGAGCCGATGGGGACGACCCTGCAGGCCGTCCTGA
GCGCCACAGACGGGGATTTACCTGCCGAGTCCAAGGCGACAGACAACAGATCACTTTGTT
AGAGAATAAGATAATATCAAACAAAAGAAAGTAAAATAAAACCCTTCTTATGAGCGGCAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               60-710, gnl|bosTau2|chr6 (7690075-7690708)
               

               
               60-710, gnl|Hg17|chr4 (111891897-111891200)
               

               
               60-710, gnl|Mm7|chr3 (129063623-129064240)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               60-710, gnl|bosTau2|chr6 (7690075-7690708)
               

               
               60-710, gnl|Hg17|chr4 (111891897-111891200)
               

               
               60-710, gnl|Mm7|chr3 (129063623-129064240)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               eje (0.0988338)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eje (0.0988338)

	60-710, gnl\|bosTau2\|chr6 (7690075-7690708)
	60-710, gnl\|Hg17\|chr4 (111891897-111891200)
	60-710, gnl\|Mm7\|chr3 (129063623-129064240)