Ss1.1-Pig4-TMW8043P02.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CACAGGTCGAATTCAGGCTCCAAAGAGAAGCCCCAAAGGCCAAGGTTATCAAATATAACA GAAAGTGGGAGCCGCACCTGACCTCTAGAGAATGTGGACCGGATCTATGCTCTTAATCCT TGCTTATCTTACCACAGGAGTTTGGATGAAGAGGCAGTCTTTATCTCATAGAGAAGTGGA CCCAAAAGCTGATTTCACTAGGAATCACACCATTTTGGAAGGGACTCGATTCAAAAGAGC CATTTTCCGAGGGCAATACTGTAGAAGTTTTGGTTGTTGTGAAGACAGAGATGACAGCTG TGTCACTCCGTTCTATGAGGCAAATGCAGTGTGTTACTGTGATAAATTCTGTGAAAGGGA AAATTCTGATTGCTGTCCTGATTACCAGTCATTCTGCCGTGAAGAGAAAGAATGGCGTCC TCATACGAAGCCTTGGTATCCAGAAGGTTGCCACAGAGATGGTCAACATTATGAAGAAGG ATCAGTAATTAAAGAAAACTGCAATTCCTGCACATGCTCAGGACAGCAATGGAATTGTTC CCAGCACGTATGCCTTGTTCAACCAGGATTAATTGAACACGTCAATGAAGGAGATTTTGG ATGGACAGCCCAGAACTACAGCCAGTTCTGGGGAATGACCCTAGAGGAGGGTTTCAAATA TCGCCTTGGTACCTTGCCACCTAGCCCCCTGCTTCTGAGTATGAATGAAGTGACAGCTTC TTTACCTGAAACAACTGATCTTCCAGAGTTCTTTGTAGCTTCTTATAAGTGGCCTGGATG GACCCATGGCCCACTGGATCAAAAAAATTGTGCTGCATCCTGGGCTTTTTCCACTGCAAG TGTGGCGGCTGATCGCATAGCAATTCAGTCCGAAGGTCGATACACAGCCAACCTATCCCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CACAGGTCGAATTCAGGCTCCAAAGAGAAGCCCCAAAGGCCAAGGTTATCAAATATAACA GAAAGTGGGAGCCGCACCTGACCTCTAGAGAATGTGGACCGGATCTATGCTCTTAATCCT TGCTTATCTTACCACAGGAGTTTGGATGAAGAGGCAGTCTTTATCTCATAGAGAAGTGGA CCCAAAAGCTGATTTCACTAGGAATCACACCATTTTGGAAGGGACTCGATTCAAAAGAGC CATTTTCCGAGGGCAATACTGTAGAAGTTTTGGTTGTTGTGAAGACAGAGATGACAGCTG TGTCACTCCGTTCTATGAGGCAAATGCAGTGTGTTACTGTGATAAATTCTGTGAAAGGGA AAATTCTGATTGCTGTCCTGATTACCAGTCATTCTGCCGTGAAGAGAAAGAATGGCGTCC TCATACGAAGCCTTGGTATCCAGAAGGTTGCCACAGAGATGGTCAACATTATGAAGAAGG ATCAGTAATTAAAGAAAACTGCAATTCCTGCACATGCTCAGGACAGCAATGGAATTGTTC CCAGCACGTATGCCTTGTTCAACCAGGATTAATTGAACACGTCAATGAAGGAGATTTTGG ATGGACAGCCCAGAACTACAGCCAGTTCTGGGGAATGACCCTAGAGGAGGGTTTCAAATA TCGCCTTGGTACCTTGCCACCTAGCCCCCTGCTTCTGAGTATGAATGAAGTGACAGCTTC TTTACCTGAAACAACTGATCTTCCAGAGTTCTTTGTAGCTTCTTATAAGTGGCCTGGATG GACCCATGGCCCACTGGATCAAAAAAATTGTGCTGCATCCTGGGCTTTTTCCACTGCAAG TGTGGCGGCTGATCGCATAGCAATTCAGTCCGAAGGTCGATACACAGCCAACCTATCCCC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 30 entry(ies) | More info |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
| 15-448, gnl|bosTau2|chr23 (4491574-4491143) | |
| 15-448, gnl|canFam2|chr12 (24789569-24789962) | |
| 15-448, gnl|dasNov1|scaffold_2025 (88924-89327) | |
| 15-448, gnl|echTel1|scaffold_320610 (35153-35556) | |
| 15-448, gnl|hg17|chr6 (54281179-54281582) | |
| 15-448, gnl|Hg17|chr6 (54281231-54281664) | |
| 15-448, gnl|loxAfr1|scaffold_39438 (1084-681) | |
| 15-448, gnl|mm7|chr9 (77083177-77082777) | |
| 15-448, gnl|Mm7|chr9 (77083123-77082693) | |
| 15-448, gnl|monDom2|scaffold_0 (182269537-182269110) | |
| 15-448, gnl|panTro1|chr5 (55323628-55324031) | |
| 15-448, gnl|rheMac2|chr4 (53993402-53993805) | |
| 15-448, gnl|rn3|chr8 (81966210-81966616) | |
| 600-714, gnl|bosTau2|chr23 (4468154-4468040) | |
| 600-714, gnl|canFam2|chr12 (24803892-24804165) | |
| 600-714, gnl|dasNov1|scaffold_2025 (107692-107976) | |
| 600-714, gnl|echTel1|scaffold_176805 (2158-2448) | |
| 600-714, gnl|hg17|chr6 (54299450-54299749) | |
| 600-714, gnl|Hg17|chr6 (54299558-54299672) | |
| 600-714, gnl|loxAfr1|scaffold_2825 (13291-13595) | |
| 600-714, gnl|mm7|chr9 (77064453-77064163) | |
| 600-714, gnl|Mm7|chr9 (77064351-77064237) | |
| 600-714, gnl|monDom2|scaffold_0 (182247748-182247472) | |
| 600-714, gnl|oryCun1|scaffold_122377 (5428-5714) | |
| 600-714, gnl|panTro1|chr5 (55342027-55342326) | |
| 600-714, gnl|rheMac2|chr4 (54011696-54011987) | |
| 600-714, gnl|rn3|chr8 (81986953-81987251) | |
| 716-841, gnl|bosTau2|chr23 (4452614-4452489) | |
| 716-841, gnl|Hg17|chr6 (54315983-54316108) | |
| 716-841, gnl|Mm7|chr9 (77046411-77046286) |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 15-448, gnl|bosTau2|chr23 (4491574-4491143) | |
| 15-448, gnl|canFam2|chr12 (24789569-24789962) | |
| 15-448, gnl|dasNov1|scaffold_2025 (88924-89327) | |
| 15-448, gnl|echTel1|scaffold_320610 (35153-35556) | |
| 15-448, gnl|hg17|chr6 (54281179-54281582) | |
| 15-448, gnl|Hg17|chr6 (54281231-54281664) | |
| 15-448, gnl|loxAfr1|scaffold_39438 (1084-681) | |
| 15-448, gnl|mm7|chr9 (77083177-77082777) | |
| 15-448, gnl|Mm7|chr9 (77083123-77082693) | |
| 15-448, gnl|monDom2|scaffold_0 (182269537-182269110) | |
| 15-448, gnl|panTro1|chr5 (55323628-55324031) | |
| 15-448, gnl|rheMac2|chr4 (53993402-53993805) | |
| 15-448, gnl|rn3|chr8 (81966210-81966616) | |
| 600-714, gnl|bosTau2|chr23 (4468154-4468040) | |
| 600-714, gnl|canFam2|chr12 (24803892-24804165) | |
| 600-714, gnl|dasNov1|scaffold_2025 (107692-107976) | |
| 600-714, gnl|echTel1|scaffold_176805 (2158-2448) | |
| 600-714, gnl|hg17|chr6 (54299450-54299749) | |
| 600-714, gnl|Hg17|chr6 (54299558-54299672) | |
| 600-714, gnl|loxAfr1|scaffold_2825 (13291-13595) | |
| 600-714, gnl|mm7|chr9 (77064453-77064163) | |
| 600-714, gnl|Mm7|chr9 (77064351-77064237) | |
| 600-714, gnl|monDom2|scaffold_0 (182247748-182247472) | |
| 600-714, gnl|oryCun1|scaffold_122377 (5428-5714) | |
| 600-714, gnl|panTro1|chr5 (55342027-55342326) | |
| 600-714, gnl|rheMac2|chr4 (54011696-54011987) | |
| 600-714, gnl|rn3|chr8 (81986953-81987251) | |
| 716-841, gnl|bosTau2|chr23 (4452614-4452489) | |
| 716-841, gnl|Hg17|chr6 (54315983-54316108) | |
| 716-841, gnl|Mm7|chr9 (77046411-77046286) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cki (0.165235) | |
| nco (0.161734) |