Ss1.1-Pig4-TMW8044D03.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTCCGGCTTTTATTAGCAATCATTCTCCTGGGGGGTTGGCTGCACCTTTCTCCTGTGTAT CTGCCTCCACCTGCACCTCTGCCACCTCCACCTCCACCTCCTCCTCCTGCTGCTGCTCCT CCTCCAGCGGCTCCTCCGCGCTCTTGGTTTTGCGGCTGGACTCGGAACTCAGCCCGTGTG GGGAACTGTAGAGCTCCTTGGACACCACGCACAGGAACTCTGCCTGGTCCTCGCTGCCGT AGTTGTAGGAGGAGCCGATGTTCACCAGCTGCTCGAAGCGCCAGCCGTCAGACATGGTGG AGACCATCTGCGTGAGCTCCTCCTCCTGGCACTGCAGCACGCGGTACACGTGCTTGGGTG GCACCTGTGTGACAGTATAATCCTTCTCTTCCATCCGGTCTTTGATGATGCGGATCAGCG GGCCGATGTTGTAGAACTCCGCTTCCTCCAGGACCCCCTCCTCGGCCATGTCCTTGTCCA GCACCAGCTTGCCGTGCCGGAGGAAGTTCAGGATGGGCCCGAAGTAGGTGGGGTCTCGGT CGATGAGGTAGGCCCCAGTCTCATCCCGGTCGGACTGCAGCTCTTCCCCCTGGCACAGGC GGCTGAGGAAGGACTTCTGCTCCCTGCATAGCGTCTGCCGGGTGGTCAGGAACACCGTGC CCCCCACGTTGAGCCGCACCCACTTGCCCCAGCCGCCCGCCCCCGCCGGCGGCGCTGCCT CGCCGGCCTCCATCCTCATCGCTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTCCGGCTTTTATTAGCAATCATTCTCCTGGGGGGTTGGCTGCACCTTTCTCCTGTGTAT CTGCCTCCACCTGCACCTCTGCCACCTCCACCTCCACCTCCTCCTCCTGCTGCTGCTCCT CCTCCAGCGGCTCCTCCGCGCTCTTGGTTTTGCGGCTGGACTCGGAACTCAGCCCGTGTG GGGAACTGTAGAGCTCCTTGGACACCACGCACAGGAACTCTGCCTGGTCCTCGCTGCCGT AGTTGTAGGAGGAGCCGATGTTCACCAGCTGCTCGAAGCGCCAGCCGTCAGACATGGTGG AGACCATCTGCGTGAGCTCCTCCTCCTGGCACTGCAGCACGCGGTACACGTGCTTGGGTG GCACCTGTGTGACAGTATAATCCTTCTCTTCCATCCGGTCTTTGATGATGCGGATCAGCG GGCCGATGTTGTAGAACTCCGCTTCCTCCAGGACCCCCTCCTCGGCCATGTCCTTGTCCA GCACCAGCTTGCCGTGCCGGAGGAAGTTCAGGATGGGCCCGAAGTAGGTGGGGTCTCGGT CGATGAGGTAGGCCCCAGTCTCATCCCGGTCGGACTGCAGCTCTTCCCCCTGGCACAGGC GGCTGAGGAAGGACTTCTGCTCCCTGCATAGCGTCTGCCGGGTGGTCAGGAACACCGTGC CCCCCACGTTGAGCCGCACCCACTTGCCCCAGCCGCCCGCCCCCGCCGGCGGCGCTGCCT CGCCGGCCTCCATCCTCATCGCTC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
| 143-303, gnl|bosTau2|chr25 (209415-209254) | |
| 143-303, gnl|Hg17|chr16 (2692480-2692332) | |
| 143-303, gnl|Mm7|chr17 (22236861-22237022) | |
| 445-566, gnl|bosTau2|chr25 (204928-204807) | |
| 445-566, gnl|canFam2|chr6 (41457674-41457533) | |
| 445-566, gnl|canFam2|chr6 (41457648-41457540) | |
| 445-566, gnl|danRer3|chr12 (27458345-27458453) | |
| 445-566, gnl|danRer3|chrNA (20266850-20266708) | |
| 445-566, gnl|dasNov1|scaffold_161536 (7934-7796) | |
| 445-566, gnl|dasNov1|scaffold_161536 (7907-7800) | |
| 445-566, gnl|echTel1|scaffold_124543 (938-823) | |
| 445-566, gnl|echTel1|scaffold_124543 (938-827) | |
| 445-566, gnl|fr1|chrUn (101907572-101907442) | |
| 445-566, gnl|fr1|chrUn (101907556-101907448) | |
| 445-566, gnl|galGal2|chr14 (9399023-9399139) | |
| 445-566, gnl|hg17|chr16 (2603935-2604076) | |
| 445-566, gnl|Hg17|chr16 (2686053-2685936) | |
| 445-566, gnl|hg17|chr2 (242137945-242138056) | |
| 445-566, gnl|loxAfr1|scaffold_1062 (4888-4791) | |
| 445-566, gnl|loxAfr1|scaffold_1062 (4874-4788) | |
| 445-566, gnl|mm7|chr17 (22241316-22241175) | |
| 445-566, gnl|mm7|chr17 (22241290-22241179) | |
| 445-566, gnl|Mm7|chr17 (22241171-22241288) | |
| 445-566, gnl|monDom2|scaffold_29 (10654347-10654427) | |
| 445-566, gnl|oryCun1|scaffold_93333 (717-602) | |
| 445-566, gnl|oryCun1|scaffold_93333 (717-606) | |
| 445-566, gnl|panTro1|chr13_random (35851945-35851834) | |
| 445-566, gnl|panTro1|chr8 (113177818-113177677) | |
| 445-566, gnl|rheMac2|chr12 (105406879-105406984) | |
| 445-566, gnl|rheMac2|chr20 (2637161-2637302) | |
| 445-566, gnl|rn3|chr10 (13310985-13310846) | |
| 445-566, gnl|rn3|chr10 (13310961-13310853) | |
| 445-566, gnl|tetNig1|chr2 (4695236-4695100) | |
| 445-566, gnl|tetNig1|chr2 (4695214-4695106) |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 143-303, gnl|bosTau2|chr25 (209415-209254) | |
| 143-303, gnl|Hg17|chr16 (2692480-2692332) | |
| 143-303, gnl|Mm7|chr17 (22236861-22237022) | |
| 445-566, gnl|bosTau2|chr25 (204928-204807) | |
| 445-566, gnl|canFam2|chr6 (41457674-41457533) | |
| 445-566, gnl|canFam2|chr6 (41457648-41457540) | |
| 445-566, gnl|danRer3|chr12 (27458345-27458453) | |
| 445-566, gnl|danRer3|chrNA (20266850-20266708) | |
| 445-566, gnl|dasNov1|scaffold_161536 (7934-7796) | |
| 445-566, gnl|dasNov1|scaffold_161536 (7907-7800) | |
| 445-566, gnl|echTel1|scaffold_124543 (938-823) | |
| 445-566, gnl|echTel1|scaffold_124543 (938-827) | |
| 445-566, gnl|fr1|chrUn (101907572-101907442) | |
| 445-566, gnl|fr1|chrUn (101907556-101907448) | |
| 445-566, gnl|galGal2|chr14 (9399023-9399139) | |
| 445-566, gnl|hg17|chr16 (2603935-2604076) | |
| 445-566, gnl|Hg17|chr16 (2686053-2685936) | |
| 445-566, gnl|hg17|chr2 (242137945-242138056) | |
| 445-566, gnl|loxAfr1|scaffold_1062 (4888-4791) | |
| 445-566, gnl|loxAfr1|scaffold_1062 (4874-4788) | |
| 445-566, gnl|mm7|chr17 (22241316-22241175) | |
| 445-566, gnl|mm7|chr17 (22241290-22241179) | |
| 445-566, gnl|Mm7|chr17 (22241171-22241288) | |
| 445-566, gnl|monDom2|scaffold_29 (10654347-10654427) | |
| 445-566, gnl|oryCun1|scaffold_93333 (717-602) | |
| 445-566, gnl|oryCun1|scaffold_93333 (717-606) | |
| 445-566, gnl|panTro1|chr13_random (35851945-35851834) | |
| 445-566, gnl|panTro1|chr8 (113177818-113177677) | |
| 445-566, gnl|rheMac2|chr12 (105406879-105406984) | |
| 445-566, gnl|rheMac2|chr20 (2637161-2637302) | |
| 445-566, gnl|rn3|chr10 (13310985-13310846) | |
| 445-566, gnl|rn3|chr10 (13310961-13310853) | |
| 445-566, gnl|tetNig1|chr2 (4695236-4695100) | |
| 445-566, gnl|tetNig1|chr2 (4695214-4695106) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eep (0.122564) |