Non-Coding RNA Search

Ss1.1-Pig4-TMW8044E05.3

Sequence:


               
               CTCTGCCAGAGGTGGATTTCGCCATCCCGCCAGGCAGGGGCAGGAGTCAGGAGTTGATGC
AGAGCCAGCCCCAGGAGCCCGTTAGCATGCCTCAGACGCTGACCAGCACGCTGGAGCACA
TCGTGGGCCAGCTGGACGTCCTCACCCAGACAGTCTCCATCCTGGAGCAGCGGTTGACCC
TGACAGAGGACAAGCTGAAGCAGTGTCTGGAGAACCAGCAGCTAATCATGCAGAGAACAA
CACCGTGATCGGGGGAGCAAGAATCAAGAGCTCGGTTGATTTTGGGGGGTGGCAGGCCTT
GGGGTTTGTACTGTGCGGCTTGGGCAAATAAATACAGGGGGTTCAGCTCTGGGAAGCACA
TCCCTCCCCAAGTCCCAGGGGTCCAGCGTTCTGCCCCCCATCCAGAAGGAGGTGGGAGGG
GCCATAGGTAGGGCCCACACAGGCACAGCTGGCCACTTTTGGTTTAATGTGCAGCAGCCA
CTTGAAAATGGTTGCTCCCTTGGAATCCTGAGGAGCCCTAGGATGGCAGCGCCCGTCTCC
ACTGGGACTGGTCAACCTTTCTACCGTATGACTGGTTTTTCCTACCCATCCCAGCGTAGA
AATGGACTGCTTATTGGTTGGATGAGCCAGGGGTTTCCTCGTAGTCTGACGGAAAGCCCA
CCTGAGTCTGATTTATCCATTAACAAGCACTGGGTAGGGGCAGGGGGGTAGTGGCTTTGC
AGTGGTCTTGATTTCTATCCCACACATGTTCACTGGGGCGTGGTGGCTTCCTCAGCATGC
ATAAGGGCAAAGGAATCTGAACATTAAAACAAACTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCTGCCAGAGGTGGATTTCGCCATCCCGCCAGGCAGGGGCAGGAGTCAGGAGTTGATGC
AGAGCCAGCCCCAGGAGCCCGTTAGCATGCCTCAGACGCTGACCAGCACGCTGGAGCACA
TCGTGGGCCAGCTGGACGTCCTCACCCAGACAGTCTCCATCCTGGAGCAGCGGTTGACCC
TGACAGAGGACAAGCTGAAGCAGTGTCTGGAGAACCAGCAGCTAATCATGCAGAGAACAA
CACCGTGATCGGGGGAGCAAGAATCAAGAGCTCGGTTGATTTTGGGGGGTGGCAGGCCTT
GGGGTTTGTACTGTGCGGCTTGGGCAAATAAATACAGGGGGTTCAGCTCTGGGAAGCACA
TCCCTCCCCAAGTCCCAGGGGTCCAGCGTTCTGCCCCCCATCCAGAAGGAGGTGGGAGGG
GCCATAGGTAGGGCCCACACAGGCACAGCTGGCCACTTTTGGTTTAATGTGCAGCAGCCA
CTTGAAAATGGTTGCTCCCTTGGAATCCTGAGGAGCCCTAGGATGGCAGCGCCCGTCTCC
ACTGGGACTGGTCAACCTTTCTACCGTATGACTGGTTTTTCCTACCCATCCCAGCGTAGA
AATGGACTGCTTATTGGTTGGATGAGCCAGGGGTTTCCTCGTAGTCTGACGGAAAGCCCA
CCTGAGTCTGATTTATCCATTAACAAGCACTGGGTAGGGGCAGGGGGGTAGTGGCTTTGC
AGTGGTCTTGATTTCTATCCCACACATGTTCACTGGGGCGTGGTGGCTTCCTCAGCATGC
ATAAGGGCAAAGGAATCTGAACATTAAAACAAACTT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               2-156, gnl|bosTau2|chr22 (36686065-36685911)
               

               
               2-156, gnl|Hg17|chr3 (52105772-52105618)
               

               
               2-156, gnl|Mm7|chr9 (106059317-106059471)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-156, gnl|bosTau2|chr22 (36686065-36685911)
               

               
               2-156, gnl|Hg17|chr3 (52105772-52105618)
               

               
               2-156, gnl|Mm7|chr9 (106059317-106059471)

Expressed library(ies): 4 entry(ies)

More info

Expressed library(ies): 4 entry(ies)

Help | Less info


               
               hea (0.408998)
               

               
               fce (0.271592)
               

               
               col (0.195008)
               

               
               cly (0.120642)

Expressed library(ies): 4 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hea (0.408998)
               

               
               fce (0.271592)
               

               
               col (0.195008)
               

               
               cly (0.120642)

	2-156, gnl\|bosTau2\|chr22 (36686065-36685911)
	2-156, gnl\|Hg17\|chr3 (52105772-52105618)
	2-156, gnl\|Mm7\|chr9 (106059317-106059471)