Ss1.1-Pig4-TMW8044G13.3
|
AGACTCAAGCCTGGCACTGCTATTTTCTTACTTGGAAATATATGCTTTCTGCTTTGATCA
AACCCAGCAAGCTGTCCTAAGTATCAGGAACTTCTTTGGGAATAGCTTTTCCTTTTCAAG
TTTTTCAGGATGTGTGCATTTCCATGAGTGTGATTTGCATTTAAATTCCACGCATCCTGC
AGTACTTAATTCCTCATGGTTCTTGAAAGACTGGTGATACTATACACATCACTGAATCTT
TACTTGTCAAAACAGAAAAGGGCTTCTCTGTTACCCTCCATTTCCCAAACCATTTTCCCC
CACCTACCCAACAAAACTTCTTCAAAATCGAAAAGTTAAAGGTGCTTTTTTGATGATCTT
CATGGGAACAATTTAGCAGCCAAGAATGATCTCCCTTTGAAAGAGTGAAAGACCTTGTGA
CATTTCACTTCAAAAATAAGCCCTGTAGCTTTTTACAGTCTCATAGTATGAAATTATACC
CTGCATGCTGACCCTCGCTTGGAATGGAATGCCAGAAATGCATGGCAGCAGCTAATAAGT
AAAGCTGATTAACTATTTATTTGTCAATGTTATTATTTAATGAGCTTTCACGTGTGATTT
TTTTCTAAATGTTAATTTTTTATGTTTTGAAGCTTTTTCATGTACCTAAATATTTTCTTG
TATTATTTGTGGTTGATCTAGAAATATGACAATACATGCTGTAGATATGTAAAATAAATA
TTTTAGTCTCCTTATTGCATATATGTTTTATCAACAATATGAATCTTTTAAAATCAATCA
GATGTGTTGTAAAGATGAAATATGTAATGCTTTCTTGTTCAATCTGTGCAATGAGAAGTT
GACTTGACCTTCAATTCCATCAGTTTCTTTTAACCAAAATAAACACTTCAAAAAGTTAAA
AAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AGACTCAAGCCTGGCACTGCTATTTTCTTACTTGGAAATATATGCTTTCTGCTTTGATCA
AACCCAGCAAGCTGTCCTAAGTATCAGGAACTTCTTTGGGAATAGCTTTTCCTTTTCAAG
TTTTTCAGGATGTGTGCATTTCCATGAGTGTGATTTGCATTTAAATTCCACGCATCCTGC
AGTACTTAATTCCTCATGGTTCTTGAAAGACTGGTGATACTATACACATCACTGAATCTT
TACTTGTCAAAACAGAAAAGGGCTTCTCTGTTACCCTCCATTTCCCAAACCATTTTCCCC
CACCTACCCAACAAAACTTCTTCAAAATCGAAAAGTTAAAGGTGCTTTTTTGATGATCTT
CATGGGAACAATTTAGCAGCCAAGAATGATCTCCCTTTGAAAGAGTGAAAGACCTTGTGA
CATTTCACTTCAAAAATAAGCCCTGTAGCTTTTTACAGTCTCATAGTATGAAATTATACC
CTGCATGCTGACCCTCGCTTGGAATGGAATGCCAGAAATGCATGGCAGCAGCTAATAAGT
AAAGCTGATTAACTATTTATTTGTCAATGTTATTATTTAATGAGCTTTCACGTGTGATTT
TTTTCTAAATGTTAATTTTTTATGTTTTGAAGCTTTTTCATGTACCTAAATATTTTCTTG
TATTATTTGTGGTTGATCTAGAAATATGACAATACATGCTGTAGATATGTAAAATAAATA
TTTTAGTCTCCTTATTGCATATATGTTTTATCAACAATATGAATCTTTTAAAATCAATCA
GATGTGTTGTAAAGATGAAATATGTAATGCTTTCTTGTTCAATCTGTGCAATGAGAAGTT
GACTTGACCTTCAATTCCATCAGTTTCTTTTAACCAAAATAAACACTTCAAAAAGTTAAA
AAAAAAAAAAAA
|
|
5-379, gnl|bosTau2|chr4 (7841438-7841069) |
|
5-379, gnl|canFam2|chr14 (33972162-33972564) |
|
5-379, gnl|dasNov1|scaffold_4616 (45135-45530) |
|
5-379, gnl|echTel1|scaffold_286542 (32663-32251) |
|
5-379, gnl|galGal2|chr2 (27697317-27697565) |
|
5-379, gnl|hg17|chr7 (16274974-16275364) |
|
5-379, gnl|Hg17|chr7 (16275345-16274978) |
|
5-379, gnl|mm7|chr12 (34157459-34157098) |
|
5-379, gnl|Mm7|chr12 (34157121-34157453) |
|
5-379, gnl|monDom2|scaffold_57 (9935292-9934972) |
|
5-379, gnl|oryCun1|scaffold_211394 (43422-43013) |
|
5-379, gnl|panTro1|chr6 (17161137-17161531) |
|
5-379, gnl|rheMac2|chr3 (109654223-109653830) |
|
5-379, gnl|rn3|chr6 (55073045-55072683) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
5-379, gnl|bosTau2|chr4 (7841438-7841069) |
|
5-379, gnl|canFam2|chr14 (33972162-33972564) |
|
5-379, gnl|dasNov1|scaffold_4616 (45135-45530) |
|
5-379, gnl|echTel1|scaffold_286542 (32663-32251) |
|
5-379, gnl|galGal2|chr2 (27697317-27697565) |
|
5-379, gnl|hg17|chr7 (16274974-16275364) |
|
5-379, gnl|Hg17|chr7 (16275345-16274978) |
|
5-379, gnl|mm7|chr12 (34157459-34157098) |
|
5-379, gnl|Mm7|chr12 (34157121-34157453) |
|
5-379, gnl|monDom2|scaffold_57 (9935292-9934972) |
|
5-379, gnl|oryCun1|scaffold_211394 (43422-43013) |
|
5-379, gnl|panTro1|chr6 (17161137-17161531) |
|
5-379, gnl|rheMac2|chr3 (109654223-109653830) |
|
5-379, gnl|rn3|chr6 (55073045-55072683) |
|
rec (0.346141) |
|
lin (0.291206) |
|
ret (0.257467) |
|
cbe (0.239234) |
|
fcc (0.197785) |
|
eye (0.170503) |
|
cut (0.169924) |
|
fco (0.157208) |
|
ski (0.146735) |
|
lyg (0.133103) |
|
bla (0.124347) |
|
rec (0.346141) |
|
lin (0.291206) |
|
ret (0.257467) |
|
cbe (0.239234) |
|
fcc (0.197785) |
|
eye (0.170503) |
|
cut (0.169924) |
|
fco (0.157208) |
|
ski (0.146735) |
|
lyg (0.133103) |
|
bla (0.124347) |
