Non-Coding RNA Search

Ss1.1-Pig4-TMW8044J10.3

Sequence:


               
               TTAAAAAATAATTTAAAAGAACAAGATAAAAGAATTGAAAATCTGAAAGAAAAAGTGAAC
ATACTTGAAGCCCAGAACAAAGAACTAAAAACCAAGGTGGCTCTTTGTTCTGAAACTCCC
AGGACAAAGGTGTCTAAGGCTGTCTCTACAAGTGAATTGAAGACTGAAGGCACAACCCCA
TATCTGATGTTGGTAAGGCTGCGGAAATGAGCTGGCTGCCTGGAGATCTGAATGAGGAAG
ATCATCATATGGGTCTTATTTATTCCTTGAAACACAGTCTAAGTGTACATATTAAAATGG
CTTGGTGCCAGTATTTAATGGAATTTATTGTATTTAATACATATATCGACAGCTTTGCAG
GAAGGTGACATTTCAGAAAATTAAATACATATTCAATGAAAGGAACTCTTTCTTCAAAAC
TTACTAAATGGATGAAGAAATCAGTTGCTTTCCTGTGATGGAAGATGAATTCTGCTTTAA
ACTTTTAAAAAAATCAAAAATCTGTTTGTTTTTTTTTGTTTGTTTGTTTGAAGATTTTTG
CTGAAGGGACTGGTTAAGGTTGTCAACTTTGACTTTTTGATAGTGGCTTTTATGTATAGT
TACCCCTTGGTATCCATGAGGGATTGGTTCCAGGAGCCACCTGGGGTACCAAAACCCATG
TGGATGCTCAAATCCTATCTATAAAATGGCAAATTATAGTTGATTCTCTGTATGCATGGT
ACCACATCCACTGATTCAGCCAATCATGGATGCAGAACCTGCAGATACAGAGGGCCTGCT
ATATATAAATATAAGGAAGAGTGTACAGACAGACCTCCTTTCATTGTGCCTCACAGATAC
TGATGTTTACAAATTGAAGGTATGTGGGAACCCTGCATTGTCAGATGATGGTTAGCATTT
TTTCAGCAATAAAGTGTTTTTAATGTAATTTAATTTAAGTATTAGACATAATAATATTGC
ATACTTAATAGGCTACAGGACAGTGTAAATATAACTTTTATATGCACTGGGAAACTGGAA
ATTTCATGTGACTCACTTCACTGTAATAGTCTCTTTATTGCGGTGCTCTGGAAACAAACC
TCTGCATCTCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTAAAAAATAATTTAAAAGAACAAGATAAAAGAATTGAAAATCTGAAAGAAAAAGTGAAC
ATACTTGAAGCCCAGAACAAAGAACTAAAAACCAAGGTGGCTCTTTGTTCTGAAACTCCC
AGGACAAAGGTGTCTAAGGCTGTCTCTACAAGTGAATTGAAGACTGAAGGCACAACCCCA
TATCTGATGTTGGTAAGGCTGCGGAAATGAGCTGGCTGCCTGGAGATCTGAATGAGGAAG
ATCATCATATGGGTCTTATTTATTCCTTGAAACACAGTCTAAGTGTACATATTAAAATGG
CTTGGTGCCAGTATTTAATGGAATTTATTGTATTTAATACATATATCGACAGCTTTGCAG
GAAGGTGACATTTCAGAAAATTAAATACATATTCAATGAAAGGAACTCTTTCTTCAAAAC
TTACTAAATGGATGAAGAAATCAGTTGCTTTCCTGTGATGGAAGATGAATTCTGCTTTAA
ACTTTTAAAAAAATCAAAAATCTGTTTGTTTTTTTTTGTTTGTTTGTTTGAAGATTTTTG
CTGAAGGGACTGGTTAAGGTTGTCAACTTTGACTTTTTGATAGTGGCTTTTATGTATAGT
TACCCCTTGGTATCCATGAGGGATTGGTTCCAGGAGCCACCTGGGGTACCAAAACCCATG
TGGATGCTCAAATCCTATCTATAAAATGGCAAATTATAGTTGATTCTCTGTATGCATGGT
ACCACATCCACTGATTCAGCCAATCATGGATGCAGAACCTGCAGATACAGAGGGCCTGCT
ATATATAAATATAAGGAAGAGTGTACAGACAGACCTCCTTTCATTGTGCCTCACAGATAC
TGATGTTTACAAATTGAAGGTATGTGGGAACCCTGCATTGTCAGATGATGGTTAGCATTT
TTTCAGCAATAAAGTGTTTTTAATGTAATTTAATTTAAGTATTAGACATAATAATATTGC
ATACTTAATAGGCTACAGGACAGTGTAAATATAACTTTTATATGCACTGGGAAACTGGAA
ATTTCATGTGACTCACTTCACTGTAATAGTCTCTTTATTGCGGTGCTCTGGAAACAAACC
TCTGCATCTCTG

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

Help | Less info


               
               819-1081, gnl|bosTau2|chr5 (21783015-21782748)

Aligned organism(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               819-1081, gnl|bosTau2|chr5 (21783015-21782748)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               mgm (0.360685)
               

               
               ldo (0.0970026)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mgm (0.360685)
               

               
               ldo (0.0970026)