Non-Coding RNA Search

Ss1.1-Pig4-TMW8044O03.5

Sequence:


               
               GTTTGGGAACCGGGAGGCCGGAAGGAATGGAGCTGGGGAAGGGGAGCGTAATCACAGTTC
ACAAACATCGTGAGAGTCTGGTAGTAAAGACAGAGATTAAGTAAAACAGGTTTTACTGTT
GCGCTGCGTTCAGTTCCTACGAGATGTACATAAAGTGTTGGTCCTTTGAGACGGACATGC
TTGATGATCCGTATGGTGGGAAACGAGAGTTACTGTACACAAGCACTGGCAAGCTCTTTA
TAGACCCCTATTTCTTTAAAGCAAATTCAGATGAAATAGGAAACCCCTGGTCTGCTATAC
AGCCCCTATTGGATTCTTTGGTTACGTGTAAGAAATTGCCTGTTTAGCCAGAAGGCTGGT
GAAAATACCTACATCAGACTTTTTTTTTTTTTAATTTTATTATATGCAGGTGAGTGTCGA
AACTGTTAAAATTCCAATTTGTTTTCATCCAGTATTAGTTTAGTTCTCCACATACATAGC
AAACCCCATCCAGGTGCTATCAGATGACCAGTTACTGCTTAATTAACTCGGTGTAAAGTT
TGACATACACATTAATGTCAATAGTTTATTACAAGTTGTGTAAAACGGACTCTAGTTTAA
AAATGGGGAGAAAAGGATTAGGTTGCTCCTGAAACTGACTGTAGAGCATGTAAAATGATT
TGACTGGATTCTGTTCAACTGTAATCAATGACAAAGATGTATGTTGTAGACAAAGTGGCA
GAAATTAAAAAGAAATCTGCTTTTAATTTATTCTTTTTGTATTAAGAATTTGTATAGTAC
CTTTACATTTTGCAAAACGGTGTTGTCAACACTTATTAAAAGCATTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTTGGGAACCGGGAGGCCGGAAGGAATGGAGCTGGGGAAGGGGAGCGTAATCACAGTTC
ACAAACATCGTGAGAGTCTGGTAGTAAAGACAGAGATTAAGTAAAACAGGTTTTACTGTT
GCGCTGCGTTCAGTTCCTACGAGATGTACATAAAGTGTTGGTCCTTTGAGACGGACATGC
TTGATGATCCGTATGGTGGGAAACGAGAGTTACTGTACACAAGCACTGGCAAGCTCTTTA
TAGACCCCTATTTCTTTAAAGCAAATTCAGATGAAATAGGAAACCCCTGGTCTGCTATAC
AGCCCCTATTGGATTCTTTGGTTACGTGTAAGAAATTGCCTGTTTAGCCAGAAGGCTGGT
GAAAATACCTACATCAGACTTTTTTTTTTTTTAATTTTATTATATGCAGGTGAGTGTCGA
AACTGTTAAAATTCCAATTTGTTTTCATCCAGTATTAGTTTAGTTCTCCACATACATAGC
AAACCCCATCCAGGTGCTATCAGATGACCAGTTACTGCTTAATTAACTCGGTGTAAAGTT
TGACATACACATTAATGTCAATAGTTTATTACAAGTTGTGTAAAACGGACTCTAGTTTAA
AAATGGGGAGAAAAGGATTAGGTTGCTCCTGAAACTGACTGTAGAGCATGTAAAATGATT
TGACTGGATTCTGTTCAACTGTAATCAATGACAAAGATGTATGTTGTAGACAAAGTGGCA
GAAATTAAAAAGAAATCTGCTTTTAATTTATTCTTTTTGTATTAAGAATTTGTATAGTAC
CTTTACATTTTGCAAAACGGTGTTGTCAACACTTATTAAAAGCATTTT

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               1-656, gnl|bosTau2|chr13 (16303390-16304058)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-656, gnl|bosTau2|chr13 (16303390-16304058)

Expressed library(ies): 6 entry(ies)

More info

Expressed library(ies): 6 entry(ies)

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               fhi (0.169578)
               

               
               csp (0.161186)
               

               
               lun (0.150489)
               

               
               che (0.136314)
               

               
               ssp (0.13552)
               

               
               nmm (0.132802)

Expressed library(ies): 6 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fhi (0.169578)
               

               
               csp (0.161186)
               

               
               lun (0.150489)
               

               
               che (0.136314)
               

               
               ssp (0.13552)
               

               
               nmm (0.132802)

	fhi (0.169578)
	csp (0.161186)
	lun (0.150489)
	che (0.136314)
	ssp (0.13552)
	nmm (0.132802)