Ss1.1-Pig4-TMW8045A20.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTTTTCCACTGCAAGTGTGGCGGCTGATCGCATAGCAATTCAGTCCGAAGGTCGATACAC AGCCAACCTATCCCCTCAGAATTTGATCTCCTGCTGTGCCAAGAACCGTCATGGATGCAA CAGTGGAAGCATTGATAGGGCTTGGTGGTACCTGAGAAAACGTGGGTTGGTATCCCATGC ATGTTATCCACTTTTCAAGGACCAAAATGCTACCAATAACGGCTGCGCCATGGCAAGTCG GTCTGATGGGCGGGGAAAACGGCATGCCACGAAGCCCTGTCCCAACAACTTCGAGAAATC CAACAGGATCTATCAATGTTCCCCTCCATACAGAGTCTCTTCCAATGAAACTGAGATAAT GAGAGAAATCATGCAAAATGGACCAGTTCAAGCCATAATGCAAGTCCATGAAGATTTCTT CCATTACAAGACAGGGATATATAGACATGTTACCAGCACAAATGAAGAATCAGACAAATA TCGAAAGCTTCGGACACATGCAGTCAAACTCACTGGATGGGGCACACTGAAAGGAGCACA GGGACGGAAGGAAAAGTTTTGGATTGCTGCCAATTCCTGGGGCAAGTCATGGGGAGAGAA CGGCTATTTCAGGATTCTTCGAGGAGTAAATGAATCTGACATTGAAAAGTTGATTATCGC AGCTTGGGGCCAACTGACAAATTCAGATGAACCATAACATATCATTAAATTTCCATAAGG CTATGCATTCAAGTAACCCTTTAAATTGAAGTTAAGCAATGTGAGGTTCTCTGTGACAGC AGAATCTCTGCCTCTTCACCTTGTTATTATAACATGCTTGTTTTCTTGTTTCACCCCAGG CTTTTTGCTCCTGCTTCCTTTATATGTAGACACTAACAGAGGGCAGCAAGTGGCTAACTC CCTTTCAAGTCCCCTGCTAGTCTTTATTTCCCTCTCAGGACAATGTTCTTTTTGACTTTG ATATTTCATAAACTGTGTGATGGCACTTGTTTTCAAAGTGCACAGCATTTGTCTGCAGAG ATGATCTGTTTTCTGACTTTACCAATGAGGACCCCCAAAAGCAATGAAAACATCAATTTA CCATTACGAGTTTTTTCCCACCAAATAATGCTTTCTTAATCCAGACTTTGCTTACATTTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTTTTCCACTGCAAGTGTGGCGGCTGATCGCATAGCAATTCAGTCCGAAGGTCGATACAC AGCCAACCTATCCCCTCAGAATTTGATCTCCTGCTGTGCCAAGAACCGTCATGGATGCAA CAGTGGAAGCATTGATAGGGCTTGGTGGTACCTGAGAAAACGTGGGTTGGTATCCCATGC ATGTTATCCACTTTTCAAGGACCAAAATGCTACCAATAACGGCTGCGCCATGGCAAGTCG GTCTGATGGGCGGGGAAAACGGCATGCCACGAAGCCCTGTCCCAACAACTTCGAGAAATC CAACAGGATCTATCAATGTTCCCCTCCATACAGAGTCTCTTCCAATGAAACTGAGATAAT GAGAGAAATCATGCAAAATGGACCAGTTCAAGCCATAATGCAAGTCCATGAAGATTTCTT CCATTACAAGACAGGGATATATAGACATGTTACCAGCACAAATGAAGAATCAGACAAATA TCGAAAGCTTCGGACACATGCAGTCAAACTCACTGGATGGGGCACACTGAAAGGAGCACA GGGACGGAAGGAAAAGTTTTGGATTGCTGCCAATTCCTGGGGCAAGTCATGGGGAGAGAA CGGCTATTTCAGGATTCTTCGAGGAGTAAATGAATCTGACATTGAAAAGTTGATTATCGC AGCTTGGGGCCAACTGACAAATTCAGATGAACCATAACATATCATTAAATTTCCATAAGG CTATGCATTCAAGTAACCCTTTAAATTGAAGTTAAGCAATGTGAGGTTCTCTGTGACAGC AGAATCTCTGCCTCTTCACCTTGTTATTATAACATGCTTGTTTTCTTGTTTCACCCCAGG CTTTTTGCTCCTGCTTCCTTTATATGTAGACACTAACAGAGGGCAGCAAGTGGCTAACTC CCTTTCAAGTCCCCTGCTAGTCTTTATTTCCCTCTCAGGACAATGTTCTTTTTGACTTTG ATATTTCATAAACTGTGTGATGGCACTTGTTTTCAAAGTGCACAGCATTTGTCTGCAGAG ATGATCTGTTTTCTGACTTTACCAATGAGGACCCCCAAAAGCAATGAAAACATCAATTTA CCATTACGAGTTTTTTCCCACCAAATAATGCTTTCTTAATCCAGACTTTGCTTACATTTT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 161-366, gnl|bosTau2|chr23 (4445479-4445275) | |
| 161-366, gnl|Hg17|chr6 (54322468-54322672) | |
| 161-366, gnl|Mm7|chr9 (77039112-77038908) | |
| 391-516, gnl|bosTau2|chr23 (4439834-4439709) | |
| 391-516, gnl|canFam2|chr12 (24827809-24828022) | |
| 391-516, gnl|danRer3|chr19 (58157761-58157964) | |
| 391-516, gnl|dasNov1|scaffold_60909 (2906-2699) | |
| 391-516, gnl|echTel1|scaffold_318954 (986-769) | |
| 391-516, gnl|hg17|chr6 (54327214-54327415) | |
| 391-516, gnl|Hg17|chr6 (54327268-54327393) | |
| 391-516, gnl|loxAfr1|scaffold_2825 (38393-38614) | |
| 391-516, gnl|mm7|chr9 (77034419-77034228) | |
| 391-516, gnl|Mm7|chr9 (77034364-77034239) | |
| 391-516, gnl|monDom2|scaffold_0 (182151246-182151053) | |
| 391-516, gnl|oryCun1|scaffold_212879 (54970-55167) | |
| 391-516, gnl|panTro1|chr5 (55370082-55370282) | |
| 391-516, gnl|rheMac2|chr4 (54039753-54039953) | |
| 391-516, gnl|rn3|chr8 (82009516-82009714) | |
| 562-1134, gnl|bosTau2|chr23 (4560922-4561518) | |
| 562-1134, gnl|Hg17|chr6 (54362547-54363148) | |
| 562-1134, gnl|Mm7|chr9 (76989378-76988791) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 161-366, gnl|bosTau2|chr23 (4445479-4445275) | |
| 161-366, gnl|Hg17|chr6 (54322468-54322672) | |
| 161-366, gnl|Mm7|chr9 (77039112-77038908) | |
| 391-516, gnl|bosTau2|chr23 (4439834-4439709) | |
| 391-516, gnl|canFam2|chr12 (24827809-24828022) | |
| 391-516, gnl|danRer3|chr19 (58157761-58157964) | |
| 391-516, gnl|dasNov1|scaffold_60909 (2906-2699) | |
| 391-516, gnl|echTel1|scaffold_318954 (986-769) | |
| 391-516, gnl|hg17|chr6 (54327214-54327415) | |
| 391-516, gnl|Hg17|chr6 (54327268-54327393) | |
| 391-516, gnl|loxAfr1|scaffold_2825 (38393-38614) | |
| 391-516, gnl|mm7|chr9 (77034419-77034228) | |
| 391-516, gnl|Mm7|chr9 (77034364-77034239) | |
| 391-516, gnl|monDom2|scaffold_0 (182151246-182151053) | |
| 391-516, gnl|oryCun1|scaffold_212879 (54970-55167) | |
| 391-516, gnl|panTro1|chr5 (55370082-55370282) | |
| 391-516, gnl|rheMac2|chr4 (54039753-54039953) | |
| 391-516, gnl|rn3|chr8 (82009516-82009714) | |
| 562-1134, gnl|bosTau2|chr23 (4560922-4561518) | |
| 562-1134, gnl|Hg17|chr6 (54362547-54363148) | |
| 562-1134, gnl|Mm7|chr9 (76989378-76988791) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| kid (0.518941) | |
| cki (0.330469) | |
| sin (0.174948) |