Non-Coding RNA Search

Ss1.1-Pig4-TMW8045C23.3

Sequence:


               
               GTGGGAGGAAGGGAGGGGTGGTTTATTCGCAAAACCATGACGTCGGGATTTTTGTTGTTT
TGTACTTGCTTGGTATTTGTACATGGGGCCCTCAAACAGCAGCATCCGTGGTGGCACCTG
TCCGATGCAGCACCTAACTTCCTGCCTCAGTCACCAAAGAAACCCTGGTGCAGGGCTGCT
GCCTGACAGGGGCCAGAACTCCACGGCGCTTTCAGTCACAGGCCAGGCCACTGGTGACCA
GACGCTTTGTGCTTTCTCATTTGCTTCTTGAGACCGGGGTGTGTGTGTGCTTGTGTGTGT
GCGTCTACTTGAAGAGAACGGAACTGTCGTGTCTGATTTGCACTATGGGAGGAGGACTGA
AGTTGCCTGCCTGACAACTTGGTGCAAGATGGGCAGACTGCTGAAAACCAGAGGGTTTAA
GGATGACATTTCTGACCATTTGTGTGGGGGTTTTTTGGTTGTTTTTAAAATTTAGACAAA
ACTGCTTTGGAAGGGGAAGTCTCATGCAGGTTATAGGTCTTTCTCTGTCTAGATATCAGG
TGCTTGCAACTGGACTGCAGACTCCACCAATCACGGGCATTTTACCTTTTCTAAACACTG
CAGTTTGTTAGACTAGAGCTGAGGTTGGAGGATTCCGTAGTGCTTTAAACGTGATGCATG
TTTTAATGGATAAAAATAGCTGGTTTCTATTAATTGTATAGACAGTAAACAAAAACATTA
ATACTTCAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGGGAGGAAGGGAGGGGTGGTTTATTCGCAAAACCATGACGTCGGGATTTTTGTTGTTT
TGTACTTGCTTGGTATTTGTACATGGGGCCCTCAAACAGCAGCATCCGTGGTGGCACCTG
TCCGATGCAGCACCTAACTTCCTGCCTCAGTCACCAAAGAAACCCTGGTGCAGGGCTGCT
GCCTGACAGGGGCCAGAACTCCACGGCGCTTTCAGTCACAGGCCAGGCCACTGGTGACCA
GACGCTTTGTGCTTTCTCATTTGCTTCTTGAGACCGGGGTGTGTGTGTGCTTGTGTGTGT
GCGTCTACTTGAAGAGAACGGAACTGTCGTGTCTGATTTGCACTATGGGAGGAGGACTGA
AGTTGCCTGCCTGACAACTTGGTGCAAGATGGGCAGACTGCTGAAAACCAGAGGGTTTAA
GGATGACATTTCTGACCATTTGTGTGGGGGTTTTTTGGTTGTTTTTAAAATTTAGACAAA
ACTGCTTTGGAAGGGGAAGTCTCATGCAGGTTATAGGTCTTTCTCTGTCTAGATATCAGG
TGCTTGCAACTGGACTGCAGACTCCACCAATCACGGGCATTTTACCTTTTCTAAACACTG
CAGTTTGTTAGACTAGAGCTGAGGTTGGAGGATTCCGTAGTGCTTTAAACGTGATGCATG
TTTTAATGGATAAAAATAGCTGGTTTCTATTAATTGTATAGACAGTAAACAAAAACATTA
ATACTTCAAAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               274-726, gnl|bosTau2|chr22 (45120647-45120185)
               

               
               274-726, gnl|Hg17|chr3 (11574616-11574146)
               

               
               274-726, gnl|Mm7|chr6 (114887372-114886978)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               274-726, gnl|bosTau2|chr22 (45120647-45120185)
               

               
               274-726, gnl|Hg17|chr3 (11574616-11574146)
               

               
               274-726, gnl|Mm7|chr6 (114887372-114886978)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               pgl (0.118483)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pgl (0.118483)

	274-726, gnl\|bosTau2\|chr22 (45120647-45120185)
	274-726, gnl\|Hg17\|chr3 (11574616-11574146)
	274-726, gnl\|Mm7\|chr6 (114887372-114886978)