Ss1.1-Pig4-TMW8045I23.3
|
CAAAGCTGGAGTCATTAGCAGCAAAAAACAGAGCATTGAATGAACAGATTGCAAGACTGG
AACAAGAAAGAGAAAAAGAACCGAATCGTCTAGAGTCACTGAGAAAACTGAAAGCTTCCT
TACAAGCAGATGTTCAAAAATATCAGGCATACATGAGCAATTTGGAGTCCCATTCAGCCA
TTCTTGACCAGAAATTGAATGGTCTTGATGAAGAAATTTCTAGAGTAGAACTAGAATGTG
AAACAATGAAACAGGAGAATTCTCGACTACAGAATATTGTTGATAACCAGAAGTACTCAG
TTGCAGACATTGAGAGAATAAATCATGAAAGAAATGAATTGCAGCAGACTATTAATAAAT
TAACCAAGGACCTGGAGACTGAACAACAGCAGTTGTGGAATGAGGAGCTGAAATATGCCC
GAGGCAAAGAGGCGATTGAAACACAATTGGCAGAGTATCATAAATTGGCTAGAAAATTAA
AACTTATCCCTAAGGGTGCTGAGAATTCCAGAGGTTATGACTTTGAAATTAAGTTTAATC
CTGAAGCTGGTGCCAACTGCCTTGTCAAATATAGAGCTCAAGTTTATGTACCACTCAAGG
AACTCTTGAACCAGACTGAAGAAGAAATTAATAAAGCTCTAAATAAAAAGATGGGGTTAG
AAGATACTTTAGAACAATTAAATACAATGATAACAGAAAGCAGGAGAAGTGTGCGAACTC
TGAAAGAAGAAGTTCAAAAGCTGGACGATCTTTACCAACAAAAAGTTAAGGAAGCTGAGG
AAGAGGACAAAAAATGTGCCAATGAGCTGGAGTCCCTGGAAAAACACAAGCACCTGCTGG
AGAGTGCAGTTAACGAGGGCCTCAGTGAAGCTATGAATGAGTTAGATGCTATTCAGCGGG
AATACCAGCTAGTTGTACAGACCACAACTGAAGAAAGACGAAAAGTGGGAAATAACTTGC
AGCGTCTTTTAGAGATGGTTGCTACACATGTAGGGTCTGTGGAGAAACACCTTGAGGAGC
AGATCACTAAAGCTGATAGAGAGTATGAAGAATATGCATCTGAAGATCTCTTGGAAAATA
TTAGAGAGATTGGAGACAAGTATAAGAAGAAAGCTGCTCTTCTTAAGGCTTCTGATGAAT
GAAGATAAAATGTTGATTAAGCAAGAACTTTATTAACCGTGAAAGTTTTGGAATGTCCTT
TGTAGGTTTGAAAAATCTCTAACATATCCTGTGCCCCTCCTTACAATGAAGTCTTAATGA
CCACTTCTTCCCAAGCCTAAAGTATGTAAACCTGAAATTATGGCAACTTGTTGGATTTTT
ATTTTTAGATATGAAAAACCAGTTATATTATATACCTGGAGTTAATAAACTTGCATCAAT |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CAAAGCTGGAGTCATTAGCAGCAAAAAACAGAGCATTGAATGAACAGATTGCAAGACTGG
AACAAGAAAGAGAAAAAGAACCGAATCGTCTAGAGTCACTGAGAAAACTGAAAGCTTCCT
TACAAGCAGATGTTCAAAAATATCAGGCATACATGAGCAATTTGGAGTCCCATTCAGCCA
TTCTTGACCAGAAATTGAATGGTCTTGATGAAGAAATTTCTAGAGTAGAACTAGAATGTG
AAACAATGAAACAGGAGAATTCTCGACTACAGAATATTGTTGATAACCAGAAGTACTCAG
TTGCAGACATTGAGAGAATAAATCATGAAAGAAATGAATTGCAGCAGACTATTAATAAAT
TAACCAAGGACCTGGAGACTGAACAACAGCAGTTGTGGAATGAGGAGCTGAAATATGCCC
GAGGCAAAGAGGCGATTGAAACACAATTGGCAGAGTATCATAAATTGGCTAGAAAATTAA
AACTTATCCCTAAGGGTGCTGAGAATTCCAGAGGTTATGACTTTGAAATTAAGTTTAATC
CTGAAGCTGGTGCCAACTGCCTTGTCAAATATAGAGCTCAAGTTTATGTACCACTCAAGG
AACTCTTGAACCAGACTGAAGAAGAAATTAATAAAGCTCTAAATAAAAAGATGGGGTTAG
AAGATACTTTAGAACAATTAAATACAATGATAACAGAAAGCAGGAGAAGTGTGCGAACTC
TGAAAGAAGAAGTTCAAAAGCTGGACGATCTTTACCAACAAAAAGTTAAGGAAGCTGAGG
AAGAGGACAAAAAATGTGCCAATGAGCTGGAGTCCCTGGAAAAACACAAGCACCTGCTGG
AGAGTGCAGTTAACGAGGGCCTCAGTGAAGCTATGAATGAGTTAGATGCTATTCAGCGGG
AATACCAGCTAGTTGTACAGACCACAACTGAAGAAAGACGAAAAGTGGGAAATAACTTGC
AGCGTCTTTTAGAGATGGTTGCTACACATGTAGGGTCTGTGGAGAAACACCTTGAGGAGC
AGATCACTAAAGCTGATAGAGAGTATGAAGAATATGCATCTGAAGATCTCTTGGAAAATA
TTAGAGAGATTGGAGACAAGTATAAGAAGAAAGCTGCTCTTCTTAAGGCTTCTGATGAAT
GAAGATAAAATGTTGATTAAGCAAGAACTTTATTAACCGTGAAAGTTTTGGAATGTCCTT
TGTAGGTTTGAAAAATCTCTAACATATCCTGTGCCCCTCCTTACAATGAAGTCTTAATGA
CCACTTCTTCCCAAGCCTAAAGTATGTAAACCTGAAATTATGGCAACTTGTTGGATTTTT
ATTTTTAGATATGAAAAACCAGTTATATTATATACCTGGAGTTAATAAACTTGCATCAAT |
|
gi|60654497|gb|AAX29939.1| |
Protein identifier
|
gi|60654497|gb|AAX29939.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
193-460, gnl|bosTau2|chr24 (27105823-27105554) |
|
193-460, gnl|Hg17|chr18 (2585374-2585647) |
|
193-460, gnl|Mm7|chr17 (69788176-69787912) |
| |
|
585-696, gnl|bosTau2|chr24 (27099415-27099307) |
|
585-696, gnl|Hg17|chr18 (2591392-2591527) |
|
585-696, gnl|Mm7|chr17 (69784221-69784122) |
| |
|
790-904, gnl|bosTau2|chr24 (27091452-27091338) |
|
790-904, gnl|canFam2|chr7 (72350171-72350323) |
|
790-904, gnl|danRer3|chr19 (54978917-54979075) |
|
790-904, gnl|dasNov1|scaffold_50272 (8737-8889) |
|
790-904, gnl|echTel1|scaffold_292246 (10153-10001) |
|
790-904, gnl|galGal2|chr2 (100581215-100581356) |
|
790-904, gnl|hg17|chr18 (2598683-2598835) |
|
790-904, gnl|Hg17|chr18 (2598718-2598832) |
|
790-904, gnl|loxAfr1|scaffold_13201 (34215-34063) |
|
790-904, gnl|mm7|chr17 (69779779-69779631) |
|
790-904, gnl|Mm7|chr17 (69779746-69779632) |
|
790-904, gnl|monDom2|scaffold_21 (32034542-32034390) |
|
790-904, gnl|panTro1|chr17 (10166035-10165883) |
|
790-904, gnl|rheMac2|chr18 (11540366-11540214) |
|
790-904, gnl|rn3|chr9 (110916052-110915904) |
| |
|
1003-1285, gnl|bosTau2|chr24 (27088252-27087969) |
| |
|
1092-1277, gnl|bosTau2|chr12 (15124724-15124545) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
193-460, gnl|bosTau2|chr24 (27105823-27105554) |
|
193-460, gnl|Hg17|chr18 (2585374-2585647) |
|
193-460, gnl|Mm7|chr17 (69788176-69787912) |
| |
|
585-696, gnl|bosTau2|chr24 (27099415-27099307) |
|
585-696, gnl|Hg17|chr18 (2591392-2591527) |
|
585-696, gnl|Mm7|chr17 (69784221-69784122) |
| |
|
790-904, gnl|bosTau2|chr24 (27091452-27091338) |
|
790-904, gnl|canFam2|chr7 (72350171-72350323) |
|
790-904, gnl|danRer3|chr19 (54978917-54979075) |
|
790-904, gnl|dasNov1|scaffold_50272 (8737-8889) |
|
790-904, gnl|echTel1|scaffold_292246 (10153-10001) |
|
790-904, gnl|galGal2|chr2 (100581215-100581356) |
|
790-904, gnl|hg17|chr18 (2598683-2598835) |
|
790-904, gnl|Hg17|chr18 (2598718-2598832) |
|
790-904, gnl|loxAfr1|scaffold_13201 (34215-34063) |
|
790-904, gnl|mm7|chr17 (69779779-69779631) |
|
790-904, gnl|Mm7|chr17 (69779746-69779632) |
|
790-904, gnl|monDom2|scaffold_21 (32034542-32034390) |
|
790-904, gnl|panTro1|chr17 (10166035-10165883) |
|
790-904, gnl|rheMac2|chr18 (11540366-11540214) |
|
790-904, gnl|rn3|chr9 (110916052-110915904) |
| |
|
1003-1285, gnl|bosTau2|chr24 (27088252-27087969) |
| |
|
1092-1277, gnl|bosTau2|chr12 (15124724-15124545) |
|
liv (0.292569) |
|
cmu (0.186393) |
|
sto (0.179824) |
|
fty (0.17584) |
|
spl (0.143184) |
|
ova (0.129132) |
|
med (0.116252) |
|
liv (0.292569) |
|
cmu (0.186393) |
|
sto (0.179824) |
|
fty (0.17584) |
|
spl (0.143184) |
|
ova (0.129132) |
|
med (0.116252) |
