Ss1.1-Pig4-TMW8045O07.5S
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCGGCGGCAGGAGGAGGTGTGCGATGACCCAGAGGAGCTGCGGAGAAAAGTCCGGGAGCT GGCCGACGCCGTCCGCAACGCCAAGCACCTGGTCGTCTACACGGGCGCGGGGATCAGCAC GGCGGCCTCTATCCCAGACTACCGGGGCCCTAACGGAGTGTGGACGCTGCTTCAGAAAGG AAGAAGCGTTAGTGCTGCCGACCTGAGTGAGGCCGAGCCGACCCTCACCCACATGAGCAT CGCCCGCTTACACGAGCAGAAGCTGGTGCAGCACGTGGTGTCTCAGAACTGCGACGGGCT CCACCTGCGGAGCGGGCTGCCCCGCGCCGCCATGTCCGAGCTCCACGGGAACATGTACAT CGAAGTCTGCACGGCCTGCGTCCCCAACAGGGAGTACGTGAGGGTGTTCGACGTGACGGA GCGCACGGCCCTGCACCGACACCAGACGGGCCGCGCCTGCCACACGTGCGGGGCCCAGCT CCGGGACACCATCGTGCACTTTGGGGAGAGGGGGAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCGGCGGCAGGAGGAGGTGTGCGATGACCCAGAGGAGCTGCGGAGAAAAGTCCGGGAGCT GGCCGACGCCGTCCGCAACGCCAAGCACCTGGTCGTCTACACGGGCGCGGGGATCAGCAC GGCGGCCTCTATCCCAGACTACCGGGGCCCTAACGGAGTGTGGACGCTGCTTCAGAAAGG AAGAAGCGTTAGTGCTGCCGACCTGAGTGAGGCCGAGCCGACCCTCACCCACATGAGCAT CGCCCGCTTACACGAGCAGAAGCTGGTGCAGCACGTGGTGTCTCAGAACTGCGACGGGCT CCACCTGCGGAGCGGGCTGCCCCGCGCCGCCATGTCCGAGCTCCACGGGAACATGTACAT CGAAGTCTGCACGGCCTGCGTCCCCAACAGGGAGTACGTGAGGGTGTTCGACGTGACGGA GCGCACGGCCCTGCACCGACACCAGACGGGCCGCGCCTGCCACACGTGCGGGGCCCAGCT CCGGGACACCATCGTGCACTTTGGGGAGAGGGGGAC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 61 entry(ies) | More info |
| Aligned organism(s): 61 entry(ies) | Help | Less info |
| 15-122, gnl|bosTau2|chr19 (45436756-45436649) | |
| 15-122, gnl|canFam2|chr9 (3377677-3377565) | |
| 15-122, gnl|canFam2|chr9 (3377675-3377555) | |
| 15-122, gnl|danRer3|chr22 (48946561-48946452) | |
| 15-122, gnl|dasNov1|scaffold_96010 (10322-10216) | |
| 15-122, gnl|dasNov1|scaffold_96010 (10322-10211) | |
| 15-122, gnl|echTel1|scaffold_299303 (4823-4935) | |
| 15-122, gnl|echTel1|scaffold_299303 (4825-4945) | |
| 15-122, gnl|fr1|chrUn (148483715-148483818) | |
| 15-122, gnl|galGal2|chr3_random (675923-676034) | |
| 15-122, gnl|hg17|chr17 (77468779-77468891) | |
| 15-122, gnl|Hg17|chr17 (77468889-77468782) | |
| 15-122, gnl|hg17|chr17_random (1183310-1183430) | |
| 15-122, gnl|loxAfr1|scaffold_103794 (4599-4487) | |
| 15-122, gnl|loxAfr1|scaffold_103794 (4597-4477) | |
| 15-122, gnl|mm7|chr11 (120733531-120733643) | |
| 15-122, gnl|mm7|chr11 (120733533-120733649) | |
| 15-122, gnl|Mm7|chr11 (120733641-120733534) | |
| 15-122, gnl|monDom2|scaffold_18 (14890706-14890818) | |
| 15-122, gnl|oryCun1|scaffold_108698 (1164-1276) | |
| 15-122, gnl|oryCun1|scaffold_108698 (1166-1283) | |
| 15-122, gnl|panTro1|chr19 (81233576-81233688) | |
| 15-122, gnl|panTro1|chr19 (81233578-81233698) | |
| 15-122, gnl|rheMac2|chr16 (77347826-77347938) | |
| 15-122, gnl|rheMac2|chr16 (77347828-77347948) | |
| 15-122, gnl|rn3|chr10 (110030319-110030431) | |
| 15-122, gnl|rn3|chr10 (110030321-110030437) | |
| 15-122, gnl|tetNig1|chr18 (2131723-2131833) | |
| 15-122, gnl|tetNig1|chr18 (2131723-2131839) | |
| 15-122, gnl|xenTro1|scaffold_973 (87487-87375) | |
| 365-516, gnl|bosTau2|chr19 (45433491-45433340) | |
| 365-516, gnl|canFam2|chr9 (3381060-3380786) | |
| 365-516, gnl|canFam2|chr9 (3381109-3380786) | |
| 365-516, gnl|danRer3|chr22 (48950613-48950346) | |
| 365-516, gnl|danRer3|chr22 (48950632-48950346) | |
| 365-516, gnl|echTel1|scaffold_299303 (2132-2441) | |
| 365-516, gnl|echTel1|scaffold_299303 (2107-2441) | |
| 365-516, gnl|fr1|chrUn (148482870-148483138) | |
| 365-516, gnl|fr1|chrUn (148482870-148483138) | |
| 365-516, gnl|galGal2|chr3_random (673298-673580) | |
| 365-516, gnl|galGal2|chr3_random (673241-673580) | |
| 365-516, gnl|hg17|chr17 (77465445-77465721) | |
| 365-516, gnl|Hg17|chr17 (77465698-77465547) | |
| 365-516, gnl|hg17|chr17_random (1971505-1971806) | |
| 365-516, gnl|mm7|chr11 (120729675-120729951) | |
| 365-516, gnl|mm7|chr11 (120729635-120729951) | |
| 365-516, gnl|Mm7|chr11 (120729928-120729777) | |
| 365-516, gnl|monDom2|scaffold_18 (14887262-14887536) | |
| 365-516, gnl|monDom2|scaffold_18 (14887223-14887536) | |
| 365-516, gnl|oryCun1|scaffold_104425 (4590-4868) | |
| 365-516, gnl|oryCun1|scaffold_104425 (4564-4868) | |
| 365-516, gnl|panTro1|chr19 (81229141-81229417) | |
| 365-516, gnl|panTro1|chr19 (81229117-81229417) | |
| 365-516, gnl|rheMac2|chr16 (77343853-77344129) | |
| 365-516, gnl|rheMac2|chr16 (77343829-77344129) | |
| 365-516, gnl|rn3|chr10 (110026453-110026732) | |
| 365-516, gnl|rn3|chr10 (110026413-110026732) | |
| 365-516, gnl|tetNig1|chr18 (2130938-2131207) | |
| 365-516, gnl|tetNig1|chr18 (2130925-2131207) | |
| 365-516, gnl|xenTro1|scaffold_973 (90501-90224) | |
| 365-516, gnl|xenTro1|scaffold_973 (90524-90224) |
| Aligned organism(s): 61 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 15-122, gnl|bosTau2|chr19 (45436756-45436649) | |
| 15-122, gnl|canFam2|chr9 (3377677-3377565) | |
| 15-122, gnl|canFam2|chr9 (3377675-3377555) | |
| 15-122, gnl|danRer3|chr22 (48946561-48946452) | |
| 15-122, gnl|dasNov1|scaffold_96010 (10322-10216) | |
| 15-122, gnl|dasNov1|scaffold_96010 (10322-10211) | |
| 15-122, gnl|echTel1|scaffold_299303 (4823-4935) | |
| 15-122, gnl|echTel1|scaffold_299303 (4825-4945) | |
| 15-122, gnl|fr1|chrUn (148483715-148483818) | |
| 15-122, gnl|galGal2|chr3_random (675923-676034) | |
| 15-122, gnl|hg17|chr17 (77468779-77468891) | |
| 15-122, gnl|Hg17|chr17 (77468889-77468782) | |
| 15-122, gnl|hg17|chr17_random (1183310-1183430) | |
| 15-122, gnl|loxAfr1|scaffold_103794 (4599-4487) | |
| 15-122, gnl|loxAfr1|scaffold_103794 (4597-4477) | |
| 15-122, gnl|mm7|chr11 (120733531-120733643) | |
| 15-122, gnl|mm7|chr11 (120733533-120733649) | |
| 15-122, gnl|Mm7|chr11 (120733641-120733534) | |
| 15-122, gnl|monDom2|scaffold_18 (14890706-14890818) | |
| 15-122, gnl|oryCun1|scaffold_108698 (1164-1276) | |
| 15-122, gnl|oryCun1|scaffold_108698 (1166-1283) | |
| 15-122, gnl|panTro1|chr19 (81233576-81233688) | |
| 15-122, gnl|panTro1|chr19 (81233578-81233698) | |
| 15-122, gnl|rheMac2|chr16 (77347826-77347938) | |
| 15-122, gnl|rheMac2|chr16 (77347828-77347948) | |
| 15-122, gnl|rn3|chr10 (110030319-110030431) | |
| 15-122, gnl|rn3|chr10 (110030321-110030437) | |
| 15-122, gnl|tetNig1|chr18 (2131723-2131833) | |
| 15-122, gnl|tetNig1|chr18 (2131723-2131839) | |
| 15-122, gnl|xenTro1|scaffold_973 (87487-87375) | |
| 365-516, gnl|bosTau2|chr19 (45433491-45433340) | |
| 365-516, gnl|canFam2|chr9 (3381060-3380786) | |
| 365-516, gnl|canFam2|chr9 (3381109-3380786) | |
| 365-516, gnl|danRer3|chr22 (48950613-48950346) | |
| 365-516, gnl|danRer3|chr22 (48950632-48950346) | |
| 365-516, gnl|echTel1|scaffold_299303 (2132-2441) | |
| 365-516, gnl|echTel1|scaffold_299303 (2107-2441) | |
| 365-516, gnl|fr1|chrUn (148482870-148483138) | |
| 365-516, gnl|fr1|chrUn (148482870-148483138) | |
| 365-516, gnl|galGal2|chr3_random (673298-673580) | |
| 365-516, gnl|galGal2|chr3_random (673241-673580) | |
| 365-516, gnl|hg17|chr17 (77465445-77465721) | |
| 365-516, gnl|Hg17|chr17 (77465698-77465547) | |
| 365-516, gnl|hg17|chr17_random (1971505-1971806) | |
| 365-516, gnl|mm7|chr11 (120729675-120729951) | |
| 365-516, gnl|mm7|chr11 (120729635-120729951) | |
| 365-516, gnl|Mm7|chr11 (120729928-120729777) | |
| 365-516, gnl|monDom2|scaffold_18 (14887262-14887536) | |
| 365-516, gnl|monDom2|scaffold_18 (14887223-14887536) | |
| 365-516, gnl|oryCun1|scaffold_104425 (4590-4868) | |
| 365-516, gnl|oryCun1|scaffold_104425 (4564-4868) | |
| 365-516, gnl|panTro1|chr19 (81229141-81229417) | |
| 365-516, gnl|panTro1|chr19 (81229117-81229417) | |
| 365-516, gnl|rheMac2|chr16 (77343853-77344129) | |
| 365-516, gnl|rheMac2|chr16 (77343829-77344129) | |
| 365-516, gnl|rn3|chr10 (110026453-110026732) | |
| 365-516, gnl|rn3|chr10 (110026413-110026732) | |
| 365-516, gnl|tetNig1|chr18 (2130938-2131207) | |
| 365-516, gnl|tetNig1|chr18 (2130925-2131207) | |
| 365-516, gnl|xenTro1|scaffold_973 (90501-90224) | |
| 365-516, gnl|xenTro1|scaffold_973 (90524-90224) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pty (0.142714) |