Non-Coding RNA Search

Ss1.1-Pig4-TMW8045P09.5

Sequence:


               
               GAGTAATAAATATCTTAAAAGAATTTGAGATAGTTTCATTCCCTTTCCGTCTGGAAATAT
AAAACTCTAATATGGAAGAACCACTTATTTCCAGTAAGAAGGGTTGTTTATTCAGTTTCA
TGCTTTTTAAAAAACTTAAACTCTAGATCTCTTCTTAGGAGAGTTCTATTTTAAGACTAT
TTCATTTTAACATGAATAGTCTAGAAATTGAAATCAGTATTGTGTTAGTTTAAAAAATAT
TGATTACCTCTAATTATGGATATGATACACAAATGAAGTTATATTGTATGTATTGTAAAT
GTGGCCTTCTTTTTCATGAAACAGTTTATCTCAGAGATCTTTTCCAATCCGTATATATAA
ATCTGTCATTCTTATAACAGCTGATTTCCATAATAAGGACAGGCCATGATTTATTTGATT
GCCATAATAATGAAATTAGAAATGGGAAACTTCTAGGATTTTTTTTTGCCTGTAGCAAAC
CATGCTACACTCTGTTTATACATGCCTCTTTTTATACACGGTTCAGTACTTTTCAAGGTA
GATACCTAGAAATAGAATTTCAACAGTACGTATTGTCAGTGTGGCCTGCAAAATATTGGG
ATTTCCCTTGATTGTCTTGCTCTCCAGGATAAAATAACAGGGAGTGGATAGTTAATATCG
CCTGGATAGTTTGGATTCATTGTCTAAAATGAATCTTGTATTCTTGGTTTGGAGATTTGT
CATCATTTTTATATATTATGCACCAGTTTGGTGTAAGATTGAACATAAGGGTACTTGGGG
TGTAATATCAACTTTACATGTATGCCTTTATCCAGATGTTAGGAAATAGTAGAGCTATGA
GTAAATCACTATGGAGTAATCCTTTCAGGTAAGGAAACTCGGATTTATATCACCAAAATT
TTTCTGTTGATACCCTATTTGAATTCTTCATGCTTTTTTCAGAGGAAAATTTACGTATCC
CAAAAGGCACAAATCATAAATGTACACTTTTGAAAATAGTTAACATCCTGTAACTCACAT
CCTACCAAGATAGAGAACATTTCCATCTGACTAGAAATTTCTTTCTTAATAGCTCTAGTC
CCTGGGTAACCACTGTTCTGATATTTTCACCTTAGATTAGTTTTGTCTATTCTAGAACTT
CATCAATGTGAATTCATACTCATTTGTGCTGGCTTCTTTTACTCAGGATAATGCATATCA
GAGTCATCCACGATGCTATGATTATTAGAAATTGCTTCCATTTTTATTGCTGAATAATTT
TTCATTGTATGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGTAATAAATATCTTAAAAGAATTTGAGATAGTTTCATTCCCTTTCCGTCTGGAAATAT
AAAACTCTAATATGGAAGAACCACTTATTTCCAGTAAGAAGGGTTGTTTATTCAGTTTCA
TGCTTTTTAAAAAACTTAAACTCTAGATCTCTTCTTAGGAGAGTTCTATTTTAAGACTAT
TTCATTTTAACATGAATAGTCTAGAAATTGAAATCAGTATTGTGTTAGTTTAAAAAATAT
TGATTACCTCTAATTATGGATATGATACACAAATGAAGTTATATTGTATGTATTGTAAAT
GTGGCCTTCTTTTTCATGAAACAGTTTATCTCAGAGATCTTTTCCAATCCGTATATATAA
ATCTGTCATTCTTATAACAGCTGATTTCCATAATAAGGACAGGCCATGATTTATTTGATT
GCCATAATAATGAAATTAGAAATGGGAAACTTCTAGGATTTTTTTTTGCCTGTAGCAAAC
CATGCTACACTCTGTTTATACATGCCTCTTTTTATACACGGTTCAGTACTTTTCAAGGTA
GATACCTAGAAATAGAATTTCAACAGTACGTATTGTCAGTGTGGCCTGCAAAATATTGGG
ATTTCCCTTGATTGTCTTGCTCTCCAGGATAAAATAACAGGGAGTGGATAGTTAATATCG
CCTGGATAGTTTGGATTCATTGTCTAAAATGAATCTTGTATTCTTGGTTTGGAGATTTGT
CATCATTTTTATATATTATGCACCAGTTTGGTGTAAGATTGAACATAAGGGTACTTGGGG
TGTAATATCAACTTTACATGTATGCCTTTATCCAGATGTTAGGAAATAGTAGAGCTATGA
GTAAATCACTATGGAGTAATCCTTTCAGGTAAGGAAACTCGGATTTATATCACCAAAATT
TTTCTGTTGATACCCTATTTGAATTCTTCATGCTTTTTTCAGAGGAAAATTTACGTATCC
CAAAAGGCACAAATCATAAATGTACACTTTTGAAAATAGTTAACATCCTGTAACTCACAT
CCTACCAAGATAGAGAACATTTCCATCTGACTAGAAATTTCTTTCTTAATAGCTCTAGTC
CCTGGGTAACCACTGTTCTGATATTTTCACCTTAGATTAGTTTTGTCTATTCTAGAACTT
CATCAATGTGAATTCATACTCATTTGTGCTGGCTTCTTTTACTCAGGATAATGCATATCA
GAGTCATCCACGATGCTATGATTATTAGAAATTGCTTCCATTTTTATTGCTGAATAATTT
TTCATTGTATGA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               1-1272, gnl|bosTau2|chr23 (16954268-16955580)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-1272, gnl|bosTau2|chr23 (16954268-16955580)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               pla (0.133672)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)