Ss1.1-Pig4-TMW8046E08.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGGTGGGTAGTGCCAAGATGTCGACCGTGGCAGTCCCGGAGCTGAAGCCAGATCAGCCGG TGGAGGCGATGCGTCTTGGGCCGGGCTGGAGCCATTCGTGCCACGCCATGCTGTACGCTG CAAACCCCGGGCAGCTCTTCGGCCGCATCCCTATGCGCTTCTCGGTGCTGATGCAGATGC GTTTCGACGGGCTGCTGGGCTTTCCCGGGGGCTTCGTGGACCGGCGCTTCTGGTCATTGG AGGACGGACTGAACCGGGTGCTGGGCCTGGGCCTGGGCTGCCTGCGCCTCACGGAGGCAG ACTACTTAAGCTCACACCTGACCGAGGGCCCGCACCGCGTCGTGGCGCACCTGTACGCGC GGCAGCTGACGCTGGAGCAGCTGCACGCCGTGGAGATCAGCGCGGTGCACTCGCGCGACC ACGGCCTGGAGGTGCTGGGACTTGTGCGTGTCCCACTGTACACCCAGAAGGACCGAGTTG GTGGCTTTCCCAACTTCCTGAGCAACGCTTTCATCAGCACAGCCAAGTACCAGCTCCTCT TTGCCCTCAAGGTGCTCAATATGATGCCGGAGGAAAAGCTGGCTGAGGCCTTGGCTGCAG CCACGGAAAAGCAGAAGAAGGCCCTGGAGAAGCTGCTCCCATCTTCCTCCTGAGCACAGG CTGAAGGTGCCGCAAGGAGATGGTCTGGCAGCACTGGCTGGATGCGCAGGATGCCAACGG CAGAGCCCCCAGGGCAGGAAGGTCAGCACGGGCCGTCTCTTCGACACTGTCCAGAAAGAC GCCTCAGTGACGCTGACAGTCCCCACGGCGCCAGCCTGGCCTGGTAAGGAACTCAGTGCT CCCGGCCCTGCCCAGTGCCCCACCTTAGAGCCTCAACGGGGCGGCAGACACGCGTGGGCG AGGGCACCTTGCTCTGTAAATAAAACACCTGCACCCTGAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGGTGGGTAGTGCCAAGATGTCGACCGTGGCAGTCCCGGAGCTGAAGCCAGATCAGCCGG TGGAGGCGATGCGTCTTGGGCCGGGCTGGAGCCATTCGTGCCACGCCATGCTGTACGCTG CAAACCCCGGGCAGCTCTTCGGCCGCATCCCTATGCGCTTCTCGGTGCTGATGCAGATGC GTTTCGACGGGCTGCTGGGCTTTCCCGGGGGCTTCGTGGACCGGCGCTTCTGGTCATTGG AGGACGGACTGAACCGGGTGCTGGGCCTGGGCCTGGGCTGCCTGCGCCTCACGGAGGCAG ACTACTTAAGCTCACACCTGACCGAGGGCCCGCACCGCGTCGTGGCGCACCTGTACGCGC GGCAGCTGACGCTGGAGCAGCTGCACGCCGTGGAGATCAGCGCGGTGCACTCGCGCGACC ACGGCCTGGAGGTGCTGGGACTTGTGCGTGTCCCACTGTACACCCAGAAGGACCGAGTTG GTGGCTTTCCCAACTTCCTGAGCAACGCTTTCATCAGCACAGCCAAGTACCAGCTCCTCT TTGCCCTCAAGGTGCTCAATATGATGCCGGAGGAAAAGCTGGCTGAGGCCTTGGCTGCAG CCACGGAAAAGCAGAAGAAGGCCCTGGAGAAGCTGCTCCCATCTTCCTCCTGAGCACAGG CTGAAGGTGCCGCAAGGAGATGGTCTGGCAGCACTGGCTGGATGCGCAGGATGCCAACGG CAGAGCCCCCAGGGCAGGAAGGTCAGCACGGGCCGTCTCTTCGACACTGTCCAGAAAGAC GCCTCAGTGACGCTGACAGTCCCCACGGCGCCAGCCTGGCCTGGTAAGGAACTCAGTGCT CCCGGCCCTGCCCAGTGCCCCACCTTAGAGCCTCAACGGGGCGGCAGACACGCGTGGGCG AGGGCACCTTGCTCTGTAAATAAAACACCTGCACCCTGAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 163-434, gnl|bosTau2|chr25 (4626311-4626582) | |
| 163-434, gnl|canFam2|chr6 (39755528-39755281) | |
| 163-434, gnl|echTel1|scaffold_249291 (1944-1693) | |
| 163-434, gnl|hg17|chr16 (4683939-4684189) | |
| 163-434, gnl|Hg17|chr16 (4683972-4684243) | |
| 163-434, gnl|mm7|chr16 (4612805-4613055) | |
| 163-434, gnl|Mm7|chr16 (4612839-4613109) | |
| 163-434, gnl|monDom2|scaffold_17 (42864156-42863891) | |
| 163-434, gnl|oryCun1|scaffold_132154 (5561-5310) | |
| 163-434, gnl|panTro1|chr18 (4633588-4633838) | |
| 163-434, gnl|rheMac2|chr20 (4858013-4858263) | |
| 163-434, gnl|rn3|chr10 (10754864-10754614) | |
| 653-935, gnl|bosTau2|chr25 (4628331-4628601) | |
| 653-935, gnl|canFam2|chr6 (39753783-39753304) | |
| 653-935, gnl|hg17|chr16 (4685853-4686294) | |
| 653-935, gnl|loxAfr1|scaffold_45248 (35899-36308) | |
| 653-935, gnl|mm7|chr16 (4614490-4614729) | |
| 653-935, gnl|panTro1|chr18 (4635494-4635927) | |
| 653-935, gnl|rheMac2|chr20 (4859866-4860297) | |
| 653-935, gnl|rn3|chr10 (10753153-10752892) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 163-434, gnl|bosTau2|chr25 (4626311-4626582) | |
| 163-434, gnl|canFam2|chr6 (39755528-39755281) | |
| 163-434, gnl|echTel1|scaffold_249291 (1944-1693) | |
| 163-434, gnl|hg17|chr16 (4683939-4684189) | |
| 163-434, gnl|Hg17|chr16 (4683972-4684243) | |
| 163-434, gnl|mm7|chr16 (4612805-4613055) | |
| 163-434, gnl|Mm7|chr16 (4612839-4613109) | |
| 163-434, gnl|monDom2|scaffold_17 (42864156-42863891) | |
| 163-434, gnl|oryCun1|scaffold_132154 (5561-5310) | |
| 163-434, gnl|panTro1|chr18 (4633588-4633838) | |
| 163-434, gnl|rheMac2|chr20 (4858013-4858263) | |
| 163-434, gnl|rn3|chr10 (10754864-10754614) | |
| 653-935, gnl|bosTau2|chr25 (4628331-4628601) | |
| 653-935, gnl|canFam2|chr6 (39753783-39753304) | |
| 653-935, gnl|hg17|chr16 (4685853-4686294) | |
| 653-935, gnl|loxAfr1|scaffold_45248 (35899-36308) | |
| 653-935, gnl|mm7|chr16 (4614490-4614729) | |
| 653-935, gnl|panTro1|chr18 (4635494-4635927) | |
| 653-935, gnl|rheMac2|chr20 (4859866-4860297) | |
| 653-935, gnl|rn3|chr10 (10753153-10752892) |
| Expressed library(ies): 5 entry(ies) | More info |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
| fcc (0.39557) | |
| ebs (0.354904) | |
| nmm (0.132802) | |
| ecc (0.115035) | |
| jca (0.11396) |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fcc (0.39557) | |
| ebs (0.354904) | |
| nmm (0.132802) | |
| ecc (0.115035) | |
| jca (0.11396) |