Ss1.1-Pig4-TMW8046K14.5
|
CTGAGGAGTAATATCTTCCTTTTATTGTCTGTAGATGGTTACAAATGAAGGATTGTAGCC
TCACAGGTGCAGCTTCTGGAACAAACATCCCTTCCAATAGTCCAAAAGATTGTCTCCCTA
AATCAGCACAACTTTTGAAGTCCGTTTTTGTGAAAAATGTTGGTTGGGCTACACAGGTGA
GCGTTTCTAGTAAAGTTAATGTTTCTAAGTATAAATTAATTTGATTTCCACAGTAGTAAA
GAGTTATCAAAA------------------------------------------------
------------------------------------------------------------
------------------------------------TCCTGTGCCAGCACTAGATCTTAA
TGTGCTGAGTGAAGCCAGGGATTGAACCTGGATCCTCACAGAGACAGCCTTGCGTCCTTA
ACCTACTGAGCCACAACAAGAATTACAAATATTTTAAAGATTTCTCTTTCCAAGAAAGTT
TTTACACCTTTTTTGCATTGATTGTTAATAATTTTCATATTTTTTATTTGGATGCAGTTG
GAAAATTCTAGATATTCTTGATAATAAATTGCCTGCTAGGGCCTGGGTGTGACCAATTGT
GCCATTTGTTTTTAAAGTACAGGTCATGATGATGGCTAATTTTAAGGAGTTGGGAATGCC
CAGGGCATTTTAAGTTTTAGAAAGTATTTATAATCTAAATTACTAGAGTAACTTTGATTT
GGCAGAAAAAGAAATGTTTGCATTTAAAAGTTAGATCTACATTGAGTTTCAAATCTAAAG
AATTTTATATAGGTGTAAACCTTCATTTGTATATTAACTCAAAGCTTGAATCTTGGAGAC
TTCTGAGCATAACACATGTATTTTTTTACTTACCAATGAAGTAAAATACAGCCTAGTCCT
TAATGGGGGTAGGAAATAAAGGGAATGAAACTCAACATTTGTTGAGTACCTGCCATATGA
TGTTTTCCTCACACATTGTCTCAT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CTGAGGAGTAATATCTTCCTTTTATTGTCTGTAGATGGTTACAAATGAAGGATTGTAGCC
TCACAGGTGCAGCTTCTGGAACAAACATCCCTTCCAATAGTCCAAAAGATTGTCTCCCTA
AATCAGCACAACTTTTGAAGTCCGTTTTTGTGAAAAATGTTGGTTGGGCTACACAGGTGA
GCGTTTCTAGTAAAGTTAATGTTTCTAAGTATAAATTAATTTGATTTCCACAGTAGTAAA
GAGTTATCAAAA------------------------------------------------
------------------------------------------------------------
------------------------------------TCCTGTGCCAGCACTAGATCTTAA
TGTGCTGAGTGAAGCCAGGGATTGAACCTGGATCCTCACAGAGACAGCCTTGCGTCCTTA
ACCTACTGAGCCACAACAAGAATTACAAATATTTTAAAGATTTCTCTTTCCAAGAAAGTT
TTTACACCTTTTTTGCATTGATTGTTAATAATTTTCATATTTTTTATTTGGATGCAGTTG
GAAAATTCTAGATATTCTTGATAATAAATTGCCTGCTAGGGCCTGGGTGTGACCAATTGT
GCCATTTGTTTTTAAAGTACAGGTCATGATGATGGCTAATTTTAAGGAGTTGGGAATGCC
CAGGGCATTTTAAGTTTTAGAAAGTATTTATAATCTAAATTACTAGAGTAACTTTGATTT
GGCAGAAAAAGAAATGTTTGCATTTAAAAGTTAGATCTACATTGAGTTTCAAATCTAAAG
AATTTTATATAGGTGTAAACCTTCATTTGTATATTAACTCAAAGCTTGAATCTTGGAGAC
TTCTGAGCATAACACATGTATTTTTTTACTTACCAATGAAGTAAAATACAGCCTAGTCCT
TAATGGGGGTAGGAAATAAAGGGAATGAAACTCAACATTTGTTGAGTACCTGCCATATGA
TGTTTTCCTCACACATTGTCTCAT
|
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15-252, gnl|bosTau2|chr17 (18611750-18611992) |
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15-252, gnl|Hg17|chr4 (129173693-129173931) |
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15-252, gnl|Mm7|chr3 (40580099-40580306) |
| |
|
365-470, gnl|bosTau2|chr17 (18611996-18612107) |
|
365-470, gnl|canFam2|chr19 (16049020-16048910) |
|
365-470, gnl|echTel1|scaffold_224139 (1605-1718) |
|
365-470, gnl|hg17|chr4 (129173908-129174033) |
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365-470, gnl|Hg17|chr4 (129173935-129174049) |
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365-470, gnl|loxAfr1|scaffold_860 (152777-152901) |
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365-470, gnl|mm7|chr3 (40580287-40580400) |
|
365-470, gnl|monDom2|scaffold_137 (1282972-1283100) |
|
365-470, gnl|oryCun1|scaffold_176203 (6485-6356) |
|
365-470, gnl|panTro1|chr3 (146025388-146025513) |
|
365-470, gnl|rheMac2|chr5 (120204210-120204334) |
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365-470, gnl|rn3|chr2 (127726179-127726303) |
| |
|
531-896, gnl|bosTau2|chr17 (18612121-18612478) |
|
531-896, gnl|Hg17|chr4 (129174108-129174886) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
15-252, gnl|bosTau2|chr17 (18611750-18611992) |
|
15-252, gnl|Hg17|chr4 (129173693-129173931) |
|
15-252, gnl|Mm7|chr3 (40580099-40580306) |
| |
|
365-470, gnl|bosTau2|chr17 (18611996-18612107) |
|
365-470, gnl|canFam2|chr19 (16049020-16048910) |
|
365-470, gnl|echTel1|scaffold_224139 (1605-1718) |
|
365-470, gnl|hg17|chr4 (129173908-129174033) |
|
365-470, gnl|Hg17|chr4 (129173935-129174049) |
|
365-470, gnl|loxAfr1|scaffold_860 (152777-152901) |
|
365-470, gnl|mm7|chr3 (40580287-40580400) |
|
365-470, gnl|monDom2|scaffold_137 (1282972-1283100) |
|
365-470, gnl|oryCun1|scaffold_176203 (6485-6356) |
|
365-470, gnl|panTro1|chr3 (146025388-146025513) |
|
365-470, gnl|rheMac2|chr5 (120204210-120204334) |
|
365-470, gnl|rn3|chr2 (127726179-127726303) |
| |
|
531-896, gnl|bosTau2|chr17 (18612121-18612478) |
|
531-896, gnl|Hg17|chr4 (129174108-129174886) |
