Ss1.1-Pig4-TMW8046N01.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCGGCGGCGTTTGAGTGGAGGAAGATGGCGGCCCCGAGCGACTCGGTGTCCCGCCAGCTG TGAGGAGCCCCGAGTGCTGCAAGCGCGGCCTAGGGCGGAGCGCCTCTGCTCTGGTCCCAT CCCTGGCTCCCTCACTGCCTTCGCCAGCAGAGCGTATTTGAGAGCGTGGCGCGGGCTGGA CCAGGCAAGCTGGTTTGAAGCTTGTGGTCTCTTCTAACCGGCTTGAGGAATGATGGCTTC AGTTGCAGTTATGCTGTGGAATTGTTGAGGCTTTGGCTTGGACACACCAAATACCTTTTG TAACTTAAATTTGTTTTGCTTGTGCTTAAGAATGATGACATCATGGGTTTAAAGGGATGA AATTTGAGAGGAAATAGCATCATTTAGAATTGAATACTTAAGATTAAGCCTGTAGCTTTT ACAGGGGCCAGTGATGCTCTGTGTCATATCCCTAATTTTGAGCATATTCATGTGTATAAT CTAATTGGTTTCCTTTATATTGTATGTTGTCATTTTAGATCCTGAAACTGTTTGCTTTTG GCAAGCCTGGTATAAATACATTACTCAATCAGAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCGGCGGCGTTTGAGTGGAGGAAGATGGCGGCCCCGAGCGACTCGGTGTCCCGCCAGCTG TGAGGAGCCCCGAGTGCTGCAAGCGCGGCCTAGGGCGGAGCGCCTCTGCTCTGGTCCCAT CCCTGGCTCCCTCACTGCCTTCGCCAGCAGAGCGTATTTGAGAGCGTGGCGCGGGCTGGA CCAGGCAAGCTGGTTTGAAGCTTGTGGTCTCTTCTAACCGGCTTGAGGAATGATGGCTTC AGTTGCAGTTATGCTGTGGAATTGTTGAGGCTTTGGCTTGGACACACCAAATACCTTTTG TAACTTAAATTTGTTTTGCTTGTGCTTAAGAATGATGACATCATGGGTTTAAAGGGATGA AATTTGAGAGGAAATAGCATCATTTAGAATTGAATACTTAAGATTAAGCCTGTAGCTTTT ACAGGGGCCAGTGATGCTCTGTGTCATATCCCTAATTTTGAGCATATTCATGTGTATAAT CTAATTGGTTTCCTTTATATTGTATGTTGTCATTTTAGATCCTGAAACTGTTTGCTTTTG GCAAGCCTGGTATAAATACATTACTCAATCAGAAAA |
| Aligned organism(s): 28 entry(ies) | More info |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
| 1-185, gnl|bosTau2|chr2 (83556464-83556280) | |
| 1-185, gnl|canFam2|chr2 (84254911-84254674) | |
| 1-185, gnl|dasNov1|scaffold_35467 (1604-1852) | |
| 1-185, gnl|echTel1|scaffold_296686 (5749-6005) | |
| 1-185, gnl|hg17|chr1 (16423933-16424184) | |
| 1-185, gnl|Hg17|chr1 (16424239-16424055) | |
| 1-185, gnl|loxAfr1|scaffold_12129 (42122-41870) | |
| 1-185, gnl|mm7|chr4 (140526735-140526492) | |
| 1-185, gnl|Mm7|chr4 (140526396-140526621) | |
| 1-185, gnl|monDom2|scaffold_109 (2634266-2633986) | |
| 1-185, gnl|oryCun1|scaffold_62419 (682-430) | |
| 1-185, gnl|panTro1|chr1_random (28484718-28484467) | |
| 1-185, gnl|rheMac2|chr1 (19148537-19148785) | |
| 1-185, gnl|rn3|chr5 (160016073-160015830) | |
| 222-566, gnl|bosTau2|chr2 (83555305-83554959) | |
| 222-566, gnl|canFam2|chr2 (84256264-84255263) | |
| 222-566, gnl|dasNov1|scaffold_35467 (316-1227) | |
| 222-566, gnl|echTel1|scaffold_296686 (4400-5315) | |
| 222-566, gnl|hg17|chr1 (16422590-16423548) | |
| 222-566, gnl|Hg17|chr1 (16423036-16422686) | |
| 222-566, gnl|loxAfr1|scaffold_12129 (43449-42532) | |
| 222-566, gnl|mm7|chr4 (140528091-140527137) | |
| 222-566, gnl|Mm7|chr4 (140527630-140527977) | |
| 222-566, gnl|monDom2|scaffold_109 (2636124-2635202) | |
| 222-566, gnl|oryCun1|scaffold_62419 (1783-986) | |
| 222-566, gnl|panTro1|chr1_random (28486061-28485103) | |
| 222-566, gnl|rheMac2|chr1 (19147204-19148153) | |
| 222-566, gnl|rn3|chr5 (160017429-160016464) |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-185, gnl|bosTau2|chr2 (83556464-83556280) | |
| 1-185, gnl|canFam2|chr2 (84254911-84254674) | |
| 1-185, gnl|dasNov1|scaffold_35467 (1604-1852) | |
| 1-185, gnl|echTel1|scaffold_296686 (5749-6005) | |
| 1-185, gnl|hg17|chr1 (16423933-16424184) | |
| 1-185, gnl|Hg17|chr1 (16424239-16424055) | |
| 1-185, gnl|loxAfr1|scaffold_12129 (42122-41870) | |
| 1-185, gnl|mm7|chr4 (140526735-140526492) | |
| 1-185, gnl|Mm7|chr4 (140526396-140526621) | |
| 1-185, gnl|monDom2|scaffold_109 (2634266-2633986) | |
| 1-185, gnl|oryCun1|scaffold_62419 (682-430) | |
| 1-185, gnl|panTro1|chr1_random (28484718-28484467) | |
| 1-185, gnl|rheMac2|chr1 (19148537-19148785) | |
| 1-185, gnl|rn3|chr5 (160016073-160015830) | |
| 222-566, gnl|bosTau2|chr2 (83555305-83554959) | |
| 222-566, gnl|canFam2|chr2 (84256264-84255263) | |
| 222-566, gnl|dasNov1|scaffold_35467 (316-1227) | |
| 222-566, gnl|echTel1|scaffold_296686 (4400-5315) | |
| 222-566, gnl|hg17|chr1 (16422590-16423548) | |
| 222-566, gnl|Hg17|chr1 (16423036-16422686) | |
| 222-566, gnl|loxAfr1|scaffold_12129 (43449-42532) | |
| 222-566, gnl|mm7|chr4 (140528091-140527137) | |
| 222-566, gnl|Mm7|chr4 (140527630-140527977) | |
| 222-566, gnl|monDom2|scaffold_109 (2636124-2635202) | |
| 222-566, gnl|oryCun1|scaffold_62419 (1783-986) | |
| 222-566, gnl|panTro1|chr1_random (28486061-28485103) | |
| 222-566, gnl|rheMac2|chr1 (19147204-19148153) | |
| 222-566, gnl|rn3|chr5 (160017429-160016464) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| sme (0.305437) | |
| pgl (0.118483) |