Non-Coding RNA Search

Ss1.1-Pig4-TMW8047A14.5

Sequence:


               
               GCATTACTGCATGTCTGTTAAGAAACTAAAATTATGTGCCTGTGCACTGACTCATTACAA
TTCATGTAGTGGCCAAATGAAAGCAGTGTGGTTTCCTTTCAGTGCTTAAACAGAATTGCT
TTAACCCAGGTTCCCCATTTAACCCCATCCCTAGGTTAGATGGGGAAGGAGGTAGCTCCT
GATTTGCCTCTTTACTTTAAAACAGTGTGACGGTTACATATTTAGGGGGATTACTGTTTG
AACAGTTTGCACAGATGTGAGTGTTTATAAATACCAATAAATTTACATGGACTCTGTAAC
CATTCATCAAATCAGCACTGATGTTTAAATTTAAAATTAGCACAAAGGCACATGTCATCT
TTCCAATAGGTAGATCTGTGTAAGATGTTTGTGTATGGTCTTAATAGCTTGACACAGATT
TGGGAACAGAACATCTCAGCCTGAGAGCTTGGCATAATTTAAGGAGAATAAGGGTTTTCC
ATCTTGAGAAAGCATGGAAAGTAATGATCTATACCTAGATGTACTAATAAGATGAGGATT
TTCCTTTTTTGTTCTTCGTGATTTGAGATGACTCCACAGTACGAGTAGAATTTTTAAGTA
ATCTTTTCTTTTTGATTTAGCAATATTTTACAAATGCTATTTCCTTTAGGTTTTACTGTA
AATATTAATCATCATGTCACTTCAAAGGCTAGCCTTTTATTATTATATTAAATGACATAC
ATACATTGATAATTATAATTATATATCTGTATTTTATTAAAAATGCTTAAGAAATTATAT
ATTAAAGTGTGTTACTAAACCCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCATTACTGCATGTCTGTTAAGAAACTAAAATTATGTGCCTGTGCACTGACTCATTACAA
TTCATGTAGTGGCCAAATGAAAGCAGTGTGGTTTCCTTTCAGTGCTTAAACAGAATTGCT
TTAACCCAGGTTCCCCATTTAACCCCATCCCTAGGTTAGATGGGGAAGGAGGTAGCTCCT
GATTTGCCTCTTTACTTTAAAACAGTGTGACGGTTACATATTTAGGGGGATTACTGTTTG
AACAGTTTGCACAGATGTGAGTGTTTATAAATACCAATAAATTTACATGGACTCTGTAAC
CATTCATCAAATCAGCACTGATGTTTAAATTTAAAATTAGCACAAAGGCACATGTCATCT
TTCCAATAGGTAGATCTGTGTAAGATGTTTGTGTATGGTCTTAATAGCTTGACACAGATT
TGGGAACAGAACATCTCAGCCTGAGAGCTTGGCATAATTTAAGGAGAATAAGGGTTTTCC
ATCTTGAGAAAGCATGGAAAGTAATGATCTATACCTAGATGTACTAATAAGATGAGGATT
TTCCTTTTTTGTTCTTCGTGATTTGAGATGACTCCACAGTACGAGTAGAATTTTTAAGTA
ATCTTTTCTTTTTGATTTAGCAATATTTTACAAATGCTATTTCCTTTAGGTTTTACTGTA
AATATTAATCATCATGTCACTTCAAAGGCTAGCCTTTTATTATTATATTAAATGACATAC
ATACATTGATAATTATAATTATATATCTGTATTTTATTAAAAATGCTTAAGAAATTATAT
ATTAAAGTGTGTTACTAAACCCTT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-804, gnl|bosTau2|chr9 (35803073-35803869)
               

               
               1-804, gnl|Hg17|chr6 (85501669-85500877)
               

               
               1-804, gnl|Mm7|chr9 (87804680-87803930)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-804, gnl|bosTau2|chr9 (35803073-35803869)
               

               
               1-804, gnl|Hg17|chr6 (85501669-85500877)
               

               
               1-804, gnl|Mm7|chr9 (87804680-87803930)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               vin (0.332557)
               

               
               aor (0.195274)
               

               
               eye (0.170503)
               

               
               bla (0.124347)

Expressed library(ies): 4 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               vin (0.332557)
               

               
               aor (0.195274)
               

               
               eye (0.170503)
               

               
               bla (0.124347)

	1-804, gnl\|bosTau2\|chr9 (35803073-35803869)
	1-804, gnl\|Hg17\|chr6 (85501669-85500877)
	1-804, gnl\|Mm7\|chr9 (87804680-87803930)