Non-Coding RNA Search

Ss1.1-Pig4-TMW8047B10.3

Sequence:


               
               GGTTGTTCTTCCAGGCTGGCCAGCTCTCTGGCACATTTCTTTTGGTCTCTGTGTGTGTCA
GTCTCTCCTGTCACTCCCATTTCCCATTTCTCACCTATTGTCTCAGCTGTTGGTGAGAAC
TGAAGTCAGGAAACACCCTCACAATTCTGAAAATAAGAACCTATCCATCACAAATGAGAC
AGTCTTTTGCTGTACAATGGTTGACATTTCAATCTGTGATTAAAATGTATAGCATCCAAG
CTCTGATTAGCAATATTTCTTTCAATTAGATGCCCAGATTAATGATTTTTAATTCCGCAT
TTCCTTTGGGTATTTTATTTTAAATTTTATAATAGCTCAGGTTTCTTTTTAGAGCAGGTT
AATGCAGAGACATGAGAAAGATATATTTGGCAGTTTTTGAGTTAACATGATTATATTTTA
TAATTTCCTAAAAACATCTCCAGTGTGTTATATCTCAGCTGGTTACTTAGCAAATGTAAT
GGGTTTCTAAAACTTAATAACAGCTGCTATGTTTGCTTTAAAATACTGTTGTAAATAACC
ATCTACCTAGATTGAGTTACCTATGTCAAGGGGAATAGTAAGAGAATCCATCCCACTATA
CCTTCCTTTGTGGGTACTTCACCATTTGAGGGTATCCTGTGTGAAAAAACAAAACAGAGA
GTAGCTAAGTGTTTTGTGTGCTGATAAGTTTAGGGCAGTTGATTATAGGTCAGCTTTGGT
TGTTTAAAATTTCATACAGTGCTCTTAGAAATATACTTTAAATTTCATAACTTCAAGAGT
TTTCTTTTATTAGACAGTGTCATGTGGAAATTTCCAACTTTGAGAGCTCAGGTATTTGTG
TAACTGATGTGCAGAAATGACTTTAAATTGCCTTTTGTTACATTGCAACTTAGAATAAAT
TTTCATAATTCATATTAATCATATCATAGATGTCAGAGATATAAATGGTTTAATTCAATT
TCTAAGTTGTGATATTCAGTGTGATTCAGGGTGAGTTCTGAATATTTAAGTATGGTTACT
GTGTCATATTCCGTCTTCCCCTCAGCAGTATTGAATTTAATAAATAAATAAATGAGAAGT
TGCTTCATTTGTCTGTGTGTGAACAAATCACTACATCCCTTTTACTGCCGTTGAGCAGTT
AACTCTGAATTGGCAAACTAGGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGTTGTTCTTCCAGGCTGGCCAGCTCTCTGGCACATTTCTTTTGGTCTCTGTGTGTGTCA
GTCTCTCCTGTCACTCCCATTTCCCATTTCTCACCTATTGTCTCAGCTGTTGGTGAGAAC
TGAAGTCAGGAAACACCCTCACAATTCTGAAAATAAGAACCTATCCATCACAAATGAGAC
AGTCTTTTGCTGTACAATGGTTGACATTTCAATCTGTGATTAAAATGTATAGCATCCAAG
CTCTGATTAGCAATATTTCTTTCAATTAGATGCCCAGATTAATGATTTTTAATTCCGCAT
TTCCTTTGGGTATTTTATTTTAAATTTTATAATAGCTCAGGTTTCTTTTTAGAGCAGGTT
AATGCAGAGACATGAGAAAGATATATTTGGCAGTTTTTGAGTTAACATGATTATATTTTA
TAATTTCCTAAAAACATCTCCAGTGTGTTATATCTCAGCTGGTTACTTAGCAAATGTAAT
GGGTTTCTAAAACTTAATAACAGCTGCTATGTTTGCTTTAAAATACTGTTGTAAATAACC
ATCTACCTAGATTGAGTTACCTATGTCAAGGGGAATAGTAAGAGAATCCATCCCACTATA
CCTTCCTTTGTGGGTACTTCACCATTTGAGGGTATCCTGTGTGAAAAAACAAAACAGAGA
GTAGCTAAGTGTTTTGTGTGCTGATAAGTTTAGGGCAGTTGATTATAGGTCAGCTTTGGT
TGTTTAAAATTTCATACAGTGCTCTTAGAAATATACTTTAAATTTCATAACTTCAAGAGT
TTTCTTTTATTAGACAGTGTCATGTGGAAATTTCCAACTTTGAGAGCTCAGGTATTTGTG
TAACTGATGTGCAGAAATGACTTTAAATTGCCTTTTGTTACATTGCAACTTAGAATAAAT
TTTCATAATTCATATTAATCATATCATAGATGTCAGAGATATAAATGGTTTAATTCAATT
TCTAAGTTGTGATATTCAGTGTGATTCAGGGTGAGTTCTGAATATTTAAGTATGGTTACT
GTGTCATATTCCGTCTTCCCCTCAGCAGTATTGAATTTAATAAATAAATAAATGAGAAGT
TGCTTCATTTGTCTGTGTGTGAACAAATCACTACATCCCTTTTACTGCCGTTGAGCAGTT
AACTCTGAATTGGCAAACTAGGAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               3-1164, gnl|bosTau2|chr2 (16836624-16837779)
               

               
               3-1164, gnl|Hg17|chr2 (172028578-172027100)
               

               
               3-1164, gnl|Mm7|chr2 (70832986-70831825)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-1164, gnl|bosTau2|chr2 (16836624-16837779)
               

               
               3-1164, gnl|Hg17|chr2 (172028578-172027100)
               

               
               3-1164, gnl|Mm7|chr2 (70832986-70831825)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               lin (0.145603)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lin (0.145603)

	3-1164, gnl\|bosTau2\|chr2 (16836624-16837779)
	3-1164, gnl\|Hg17\|chr2 (172028578-172027100)
	3-1164, gnl\|Mm7\|chr2 (70832986-70831825)