Non-Coding RNA Search

Ss1.1-Pig4-TMW8047E21.3

Sequence:


               
               TTTTTGGGGAACTGGACAAGCATTTATTGAGAGCTGCCTGCAGCCAGGTCCTGTGGTCCC
ACAGCCTCCTGCTCTGGGAACCAAGCACCACAGCCCCCCACCACAGGGCCAGCAAGAGAG
GGAAGCAGCTTCGGGGTGCCTGCGTCTTCCCTGGGGTCCAGTCAGCTGCTGCCTCTTCTG
CACGATCGATCGGGGCACTGGTCGCAGCCACCATCCCCCACCTGCTTCCGCCATCGAGGG
GAGCAGGGCCGGGCCGAGAGCTGGGGCCCCACAGCAGGGCACAGAGCCCTTGCTCTGGGG
GGGTCCGGCCCGGGGCCCTCTGGGCCAGAGGACGGCCAAGCCTCACACCCACAGGTCCCC
CAGCCGGGCCTTGTTCTCCGACAGCCGCTCACCCCGCTCCTCCTCAGGGAACTGGATGCT
GCAAGCATCCTCGGGCGGGGGCGGCGGTGCCTCCAGGAGCAGCTGGGTCTCTGCAAAGGG
GTTGTGGTCAGCAGGCGGGCCAGGGGCCCCCACCCCCTCCCCAGGGCACAACTGACCTGG
GGGCCATGCTCTCTGCCTCCTCAGCTGCCAGACGTGCAGGCTCAGCTGGGTCACAGTCAG
GACCAGGATTCCGGTGGCCACAGCGAGGAGAAGGACAGTCAGCAGGCTGTGCGGCTCAGC
GGGCGGTGGCCCCGGGCTGCACACGGCATTGTGCGTCTTGTTCCCAGGGAACGTGGTGAG
AAACCCAAACTGGGAGCAGCTGGGACACAGGGACACAGAGCCTCCTGGTCAGCCCCCAGC
CACGGAGCAGCCCCTCCGCACGCTGCTGTCTGGGGCCCAGCAGAGGCCGCTCCCTCAGAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTGGGGAACTGGACAAGCATTTATTGAGAGCTGCCTGCAGCCAGGTCCTGTGGTCCC
ACAGCCTCCTGCTCTGGGAACCAAGCACCACAGCCCCCCACCACAGGGCCAGCAAGAGAG
GGAAGCAGCTTCGGGGTGCCTGCGTCTTCCCTGGGGTCCAGTCAGCTGCTGCCTCTTCTG
CACGATCGATCGGGGCACTGGTCGCAGCCACCATCCCCCACCTGCTTCCGCCATCGAGGG
GAGCAGGGCCGGGCCGAGAGCTGGGGCCCCACAGCAGGGCACAGAGCCCTTGCTCTGGGG
GGGTCCGGCCCGGGGCCCTCTGGGCCAGAGGACGGCCAAGCCTCACACCCACAGGTCCCC
CAGCCGGGCCTTGTTCTCCGACAGCCGCTCACCCCGCTCCTCCTCAGGGAACTGGATGCT
GCAAGCATCCTCGGGCGGGGGCGGCGGTGCCTCCAGGAGCAGCTGGGTCTCTGCAAAGGG
GTTGTGGTCAGCAGGCGGGCCAGGGGCCCCCACCCCCTCCCCAGGGCACAACTGACCTGG
GGGCCATGCTCTCTGCCTCCTCAGCTGCCAGACGTGCAGGCTCAGCTGGGTCACAGTCAG
GACCAGGATTCCGGTGGCCACAGCGAGGAGAAGGACAGTCAGCAGGCTGTGCGGCTCAGC
GGGCGGTGGCCCCGGGCTGCACACGGCATTGTGCGTCTTGTTCCCAGGGAACGTGGTGAG
AAACCCAAACTGGGAGCAGCTGGGACACAGGGACACAGAGCCTCCTGGTCAGCCCCCAGC
CACGGAGCAGCCCCTCCGCACGCTGCTGTCTGGGGCCCAGCAGAGGCCGCTCCCTCAGAG

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|61845073|ref|XP_594408.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|61845073|ref|XP_594408.1|

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               4-810, gnl|bosTau2|chr16 (38012847-38012046)
               

               
               4-810, gnl|Hg17|chr1 (1178806-1179608)
               

               
               4-810, gnl|Mm7|chr4 (155018438-155017698)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-810, gnl|bosTau2|chr16 (38012847-38012046)
               

               
               4-810, gnl|Hg17|chr1 (1178806-1179608)
               

               
               4-810, gnl|Mm7|chr4 (155018438-155017698)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               csp (0.161186)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               csp (0.161186)

	4-810, gnl\|bosTau2\|chr16 (38012847-38012046)
	4-810, gnl\|Hg17\|chr1 (1178806-1179608)
	4-810, gnl\|Mm7\|chr4 (155018438-155017698)