Ss1.1-Pig4-TMW8047H15.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTTTTTTTTTTTTTTTGGGTCTAAAATAAACTCTTTTAATTGCACATTTTCGTCTCGGGT CACCTGTGGGGTGAGAGACCCCCTCCTCACTCCCTACCCCAGCTCTGTGGGTACAATCTG ACATTGTAGTCGGGCTGTCAGTGAAAGGGTGGAGGTGGTGGGGGGCTGGCTCCTGAATCC ACACCAGGCTCTTCAGGGAAGGGAGCTCAGACCATGGTTGTACTTGCACTGCTTCAGGGC CTCGCTGAAGCCCTCACACAAGGACAGGTCACTCTGGGTAGTGGAGCAGTCCAGGAACTG CCTGATCTCATAGGCGCAGGGCCCCATCTGCATGGGCTGGGGGGCAGCGTGGGCTGGGGC CTGCTGGGCAGCAGGCTGGGCGGGCTCTGAGCTCCCCCCACTGAAGGCTCCGGTCAGGGC GCTGCCCACGACGTGTCCCACAGCCGAGCCCACGGCTACTCCGGCAGCCGTGGACGCCAT CTGCGCCATCAGGCCGGGCTGGCCCGACGGAGCGGTGGCAGGGGCTGCTGCCGAGGGCGG CGGGTGCGCGGGCAGGTGGGCAGAGGGCGCGGCGGCGCGGCTGGCTGGCCGGGCGGCCAC GCTGCGGCTCCCCCGGGGCATGGTCGCTTTGATGGGATCAGTCGAACGACCGCGAAGGTG ACGGCGGCGGCAGTTATGGCTCGAGGACCAGCGCGGAGGCGCCTGTCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTTTTTTTTTTTTTTTGGGTCTAAAATAAACTCTTTTAATTGCACATTTTCGTCTCGGGT CACCTGTGGGGTGAGAGACCCCCTCCTCACTCCCTACCCCAGCTCTGTGGGTACAATCTG ACATTGTAGTCGGGCTGTCAGTGAAAGGGTGGAGGTGGTGGGGGGCTGGCTCCTGAATCC ACACCAGGCTCTTCAGGGAAGGGAGCTCAGACCATGGTTGTACTTGCACTGCTTCAGGGC CTCGCTGAAGCCCTCACACAAGGACAGGTCACTCTGGGTAGTGGAGCAGTCCAGGAACTG CCTGATCTCATAGGCGCAGGGCCCCATCTGCATGGGCTGGGGGGCAGCGTGGGCTGGGGC CTGCTGGGCAGCAGGCTGGGCGGGCTCTGAGCTCCCCCCACTGAAGGCTCCGGTCAGGGC GCTGCCCACGACGTGTCCCACAGCCGAGCCCACGGCTACTCCGGCAGCCGTGGACGCCAT CTGCGCCATCAGGCCGGGCTGGCCCGACGGAGCGGTGGCAGGGGCTGCTGCCGAGGGCGG CGGGTGCGCGGGCAGGTGGGCAGAGGGCGCGGCGGCGCGGCTGGCTGGCCGGGCGGCCAC GCTGCGGCTCCCCCGGGGCATGGTCGCTTTGATGGGATCAGTCGAACGACCGCGAAGGTG ACGGCGGCGGCAGTTATGGCTCGAGGACCAGCGCGGAGGCGCCTGTCA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 30 entry(ies) | More info |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
| 21-213, gnl|bosTau2|chr17 (41451182-41451377) | |
| 21-213, gnl|canFam2|chr26 (31809300-31809090) | |
| 21-213, gnl|canFam2|chr26 (31809166-31809290) | |
| 21-213, gnl|canFam2|chr26 (31809298-31809093) | |
| 21-213, gnl|dasNov1|scaffold_74047 (7699-7488) | |
| 21-213, gnl|dasNov1|scaffold_74047 (7575-7691) | |
| 21-213, gnl|dasNov1|scaffold_74047 (7702-7491) | |
| 21-213, gnl|echTel1|scaffold_115254 (454-642) | |
| 21-213, gnl|echTel1|scaffold_115254 (576-472) | |
| 21-213, gnl|echTel1|scaffold_115254 (457-758) | |
| 21-213, gnl|hg17|chr19 (10188664-10188859) | |
| 21-213, gnl|hg17|chr22 (22432576-22432769) | |
| 21-213, gnl|Hg17|chr22 (22432581-22432768) | |
| 21-213, gnl|hg17|chr7 (38124701-38124829) | |
| 21-213, gnl|mm7|chr10 (75593399-75593226) | |
| 21-213, gnl|mm7|chr10 (75593275-75593389) | |
| 21-213, gnl|mm7|chr10 (75593398-75593229) | |
| 21-213, gnl|Mm7|chr10 (75593392-75593225) | |
| 21-213, gnl|panTro1|chr20 (10570703-10570899) | |
| 21-213, gnl|panTro1|chr23 (22461320-22461513) | |
| 21-213, gnl|panTro1|chr6 (39320184-39320312) | |
| 21-213, gnl|rheMac2|chr19 (10025411-10025609) | |
| 21-213, gnl|rheMac2|chr19 (10025410-10025606) | |
| 21-213, gnl|rheMac2|chr3 (87943344-87943216) | |
| 21-213, gnl|rn3|chr12 (36341705-36341535) | |
| 21-213, gnl|rn3|chr20 (13124885-13125054) | |
| 21-213, gnl|rn3|chr20 (13125005-13124895) | |
| 360-616, gnl|bosTau2|chr17 (41452596-41452854) | |
| 360-616, gnl|Hg17|chr22 (22434114-22434368) | |
| 360-616, gnl|Mm7|chr10 (75592097-75591852) |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 21-213, gnl|bosTau2|chr17 (41451182-41451377) | |
| 21-213, gnl|canFam2|chr26 (31809300-31809090) | |
| 21-213, gnl|canFam2|chr26 (31809166-31809290) | |
| 21-213, gnl|canFam2|chr26 (31809298-31809093) | |
| 21-213, gnl|dasNov1|scaffold_74047 (7699-7488) | |
| 21-213, gnl|dasNov1|scaffold_74047 (7575-7691) | |
| 21-213, gnl|dasNov1|scaffold_74047 (7702-7491) | |
| 21-213, gnl|echTel1|scaffold_115254 (454-642) | |
| 21-213, gnl|echTel1|scaffold_115254 (576-472) | |
| 21-213, gnl|echTel1|scaffold_115254 (457-758) | |
| 21-213, gnl|hg17|chr19 (10188664-10188859) | |
| 21-213, gnl|hg17|chr22 (22432576-22432769) | |
| 21-213, gnl|Hg17|chr22 (22432581-22432768) | |
| 21-213, gnl|hg17|chr7 (38124701-38124829) | |
| 21-213, gnl|mm7|chr10 (75593399-75593226) | |
| 21-213, gnl|mm7|chr10 (75593275-75593389) | |
| 21-213, gnl|mm7|chr10 (75593398-75593229) | |
| 21-213, gnl|Mm7|chr10 (75593392-75593225) | |
| 21-213, gnl|panTro1|chr20 (10570703-10570899) | |
| 21-213, gnl|panTro1|chr23 (22461320-22461513) | |
| 21-213, gnl|panTro1|chr6 (39320184-39320312) | |
| 21-213, gnl|rheMac2|chr19 (10025411-10025609) | |
| 21-213, gnl|rheMac2|chr19 (10025410-10025606) | |
| 21-213, gnl|rheMac2|chr3 (87943344-87943216) | |
| 21-213, gnl|rn3|chr12 (36341705-36341535) | |
| 21-213, gnl|rn3|chr20 (13124885-13125054) | |
| 21-213, gnl|rn3|chr20 (13125005-13124895) | |
| 360-616, gnl|bosTau2|chr17 (41452596-41452854) | |
| 360-616, gnl|Hg17|chr22 (22434114-22434368) | |
| 360-616, gnl|Mm7|chr10 (75592097-75591852) |
| Expressed library(ies): 29 entry(ies) | More info |
| Expressed library(ies): 29 entry(ies) | Help | Less info |
| nms (2.35244) | |
| mas (1.47213) | |
| hlv (0.974795) | |
| cli (0.91687) | |
| hyp (0.714184) | |
| ill (0.526778) | |
| cag (0.453583) | |
| col (0.390016) | |
| pty (0.285429) | |
| che (0.272628) | |
| fce (0.271592) | |
| cov (0.264306) | |
| cbe (0.239234) | |
| ebs (0.236602) | |
| ece (0.229305) | |
| jej (0.197844) | |
| fcc (0.197785) | |
| nep (0.183925) | |
| sto (0.179824) | |
| ton (0.1755) | |
| fhi (0.169578) | |
| nje (0.16592) | |
| lnt (0.142308) | |
| ute (0.132784) | |
| ese (0.126502) | |
| cly (0.120642) | |
| pgl (0.118483) | |
| med (0.116252) | |
| jca (0.11396) |
| Expressed library(ies): 29 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nms (2.35244) | |
| mas (1.47213) | |
| hlv (0.974795) | |
| cli (0.91687) | |
| hyp (0.714184) | |
| ill (0.526778) | |
| cag (0.453583) | |
| col (0.390016) | |
| pty (0.285429) | |
| che (0.272628) | |
| fce (0.271592) | |
| cov (0.264306) | |
| cbe (0.239234) | |
| ebs (0.236602) | |
| ece (0.229305) | |
| jej (0.197844) | |
| fcc (0.197785) | |
| nep (0.183925) | |
| sto (0.179824) | |
| ton (0.1755) | |
| fhi (0.169578) | |
| nje (0.16592) | |
| lnt (0.142308) | |
| ute (0.132784) | |
| ese (0.126502) | |
| cly (0.120642) | |
| pgl (0.118483) | |
| med (0.116252) | |
| jca (0.11396) |