Non-Coding RNA Search

Ss1.1-Pig4-TMW8048A07.5

Sequence:


               
               AACCTGGAACTTTGGATGCAGACTCAATCCCTGAGGATGATTGAAATCACAAGGAATTTG
AGAGTTAACGCGGTCCTTTAATCTGGAACCAGATTTGAGATACAGAGTTGGGGTGCAAGG
CTCAAGCAGTGATACTCATTAGGAGTTAACTTATCAGGGGCTAGATTTGGAAACTTGGGG
TTCAATCTCAGGATATGAAAGCTCAGACCTAGAGTAAGGCACCGAAAGCGGATTTCGAGC
CACAGGCCCACAGAGTGGGAGAATTTAGGCTAGATATCCACCCCTCGCATCACAGACCCG
AGTTTGGAACCTTAGCGCTGACCTTTGAGTCAGAGGTCAAGAGGTCAAAGGACATCTGGC
AGGGAAAAAGGCCTAGCTGTGGAGAAAGTCCTGAAATCAGAGCGCAAAAAGAGGAGGCTT
GAGGGTTCGGGAAGGCCGATAGATCGGAGGTCGTTGGGAGCCGCAACAACGCTCGGATAC
GGAACGGAGTCGGAAGGTAAAACACTGCTCCCCTCCCCGCAAAATGGCGACCGCGGCGCA
CAACCCTCGTGCCGAATTCGGCACGAGGCTGCCATCAGGAAGTGTGTCAGGGTTCAGCTA
ATCAAGAATGGGAAAAAAATTACAGCCTTTGTACCCCATGATGGTTGTTTGCACTTCATT
GAGGAAAATGATGAAGTTCTGGTTGCTGGATTTGGTCGCCAAGGTCATGCTGTTGGTGAC
ATTCCTGGAGTCCGCTTTAAGGTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AACCTGGAACTTTGGATGCAGACTCAATCCCTGAGGATGATTGAAATCACAAGGAATTTG
AGAGTTAACGCGGTCCTTTAATCTGGAACCAGATTTGAGATACAGAGTTGGGGTGCAAGG
CTCAAGCAGTGATACTCATTAGGAGTTAACTTATCAGGGGCTAGATTTGGAAACTTGGGG
TTCAATCTCAGGATATGAAAGCTCAGACCTAGAGTAAGGCACCGAAAGCGGATTTCGAGC
CACAGGCCCACAGAGTGGGAGAATTTAGGCTAGATATCCACCCCTCGCATCACAGACCCG
AGTTTGGAACCTTAGCGCTGACCTTTGAGTCAGAGGTCAAGAGGTCAAAGGACATCTGGC
AGGGAAAAAGGCCTAGCTGTGGAGAAAGTCCTGAAATCAGAGCGCAAAAAGAGGAGGCTT
GAGGGTTCGGGAAGGCCGATAGATCGGAGGTCGTTGGGAGCCGCAACAACGCTCGGATAC
GGAACGGAGTCGGAAGGTAAAACACTGCTCCCCTCCCCGCAAAATGGCGACCGCGGCGCA
CAACCCTCGTGCCGAATTCGGCACGAGGCTGCCATCAGGAAGTGTGTCAGGGTTCAGCTA
ATCAAGAATGGGAAAAAAATTACAGCCTTTGTACCCCATGATGGTTGTTTGCACTTCATT
GAGGAAAATGATGAAGTTCTGGTTGCTGGATTTGGTCGCCAAGGTCATGCTGTTGGTGAC
ATTCCTGGAGTCCGCTTTAAGGTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               569-744, gnl|bosTau2|chr12 (37829260-37829086)
               

               
               569-744, gnl|Hg17|chr8 (98946648-98946823)
               

               
               569-744, gnl|Mm7|chr8 (24211228-24211403)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               569-744, gnl|bosTau2|chr12 (37829260-37829086)
               

               
               569-744, gnl|Hg17|chr8 (98946648-98946823)
               

               
               569-744, gnl|Mm7|chr8 (24211228-24211403)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               mcp (0.170648)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mcp (0.170648)

	569-744, gnl\|bosTau2\|chr12 (37829260-37829086)
	569-744, gnl\|Hg17\|chr8 (98946648-98946823)
	569-744, gnl\|Mm7\|chr8 (24211228-24211403)